| Spike proteins of SARS-CoV and SARS-CoV-2 utilize different mechanisms to bind with human ACE2 Y Xie, CB Karki, D Du, H Li, J Wang, A Sobitan, S Teng, Q Tang, L Li Frontiers in molecular biosciences 7, 591873, 2020 | 103 | 2020 |
| Dg-labeler and dgl-mots dataset: Boost the autonomous driving perception Y Cui, Z Cao, Y Xie, X Jiang, F Tao, YV Chen, L Li, D Liu Proceedings of the IEEE/CVF Winter Conference on Applications of Computer …, 2022 | 33 | 2022 |
| The pH effects on SARS-CoV and SARS-CoV-2 spike proteins in the process of binding to hACE2 Y Xie, W Guo, A Lopez-Hernadez, S Teng, L Li Pathogens 11 (2), 238, 2022 | 27 | 2022 |
| Revealing the mechanism of SARS-CoV-2 spike protein binding with ACE2 Y Xie, D Du, CB Karki, W Guo, AE Lopez-Hernandez, S Sun, BY Juarez, ... Computing in science & engineering 22 (6), 21-29, 2020 | 23 | 2020 |
| StructureMan: A structure manipulation tool to study large scale biomolecular interactions Y Xian, Y Xie, SM Silva, CB Karki, W Qiu, L Li Frontiers in molecular biosciences 7, 627087, 2021 | 18 | 2021 |
| A computational model of ESAT-6 complex in membrane C Karki, Y Xian, Y Xie, S Sun, AE Lopez-Hernandez, B Juarez, J Wang, ... Journal of Theoretical and Computational Chemistry 19 (03), 2040002, 2020 | 12 | 2020 |
| Unraveling a blockchain-based framework towards patient empowerment: A scoping review envisioning future smart health technologies FI Anik, N Sakib, H Shahriar, Y Xie, HA Nahiyan, SI Ahamed Smart Health, 100401, 2023 | 11 | 2023 |
| Using computational approaches to study dengue virus capsid assembly GGS Salas, AEL Hernandez, J He, C Karki, Y Xie, S Sun, Y Xian, L Li Computational and Mathematical Biophysics 7 (1), 64-72, 2019 | 10 | 2019 |
| Hybrid method for representing ions in implicit solvation calculations S Sun, C Karki, Y Xie, Y Xian, W Guo, BZ Gao, L Li Computational and structural biotechnology journal 19, 801-811, 2021 | 9 | 2021 |
| The electrostatic features of dengue virus capsid assembly AE Lopez-Hernandez, Y Xie, W Guo, L Li Journal of Computational Biophysics and Chemistry 20 (02), 201-207, 2021 | 8 | 2021 |
| Electrostatic features for nucleocapsid proteins of SARS-CoV and SARS-CoV-2 W Guo, Y Xie, AE Lopez-Hernandez, S Sun, L Li Mathematical biosciences and engineering: MBE 18 (3), 2372, 2021 | 8 | 2021 |
| Computational study on DNA repair: the roles of electrostatic interactions between uracil-DNA glycosylase (UDG) and DNA Y Xie, CB Karki, J Chen, D Liu, L Li Frontiers in Molecular Biosciences 8, 718587, 2021 | 7 | 2021 |
| HIT web server: A hybrid method to improve electrostatic calculations for biomolecules S Sun, JA Lopez, Y Xie, W Guo, D Liu, L Li Computational and Structural Biotechnology Journal 20, 1580-1583, 2022 | 6 | 2022 |
| Computational saturation mutagenesis of SARS-CoV-1 spike glycoprotein: Stability, binding affinity, and comparison with SARS-CoV-2 A Sobitan, V Mahase, R Rhoades, D Williams, D Liu, Y Xie, L Li, Q Tang, ... Frontiers in Molecular Biosciences 8, 784303, 2021 | 6 | 2021 |
| Spike proteins of SARS-CoV and SARS-CoV-2 utilize different mechanisms to bind with human ACE2. Front Mol Biosci. 2020; 7: 591873 Y Xie, CB Karki, LH Du D, J Wang, A Sobitan, S Teng PubMed: https://www. ncbi. nlm. nih. gov/pmc/articles/PMC7755986, 2020 | 5 | 2020 |
| Using a comprehensive approach to investigate the interaction between Kinesin-5/Eg5 and the microtubule W Guo, S Sun, JE Sanchez, AE Lopez-Hernandez, TA Ale, J Chen, T Afrin, ... Computational and structural biotechnology journal 20, 4305-4314, 2022 | 4 | 2022 |
| HIT-2: Implementing machine learning algorithms to treat bound ions in biomolecules S Sun, H Xu, Y Xie, JE Sanchez, W Guo, D Liu, L Li Computational and Structural Biotechnology Journal 21, 1383-1389, 2023 | 3 | 2023 |
| Phosphorylation of Tyrosine 841 Plays a Significant Role in JAK3 Activation S Sun, G Rodriguez, Y Xie, W Guo, AEL Hernandez, JE Sanchez, ... Life 13 (4), 981, 2023 | 2 | 2023 |
| Computational analysis of hereditary spastic paraplegia mutations in the kinesin motor domains of KIF1A and KIF5A V Mahase, A Sobitan, C Johnson, F Cooper, Y Xie, L Li, S Teng Journal of Theoretical and Computational Chemistry 19 (06), 2041003, 2020 | 2 | 2020 |
| Computational Study on E-Hooks of Tubulins in the Binding Process with Kinesin Y Xie, L Li International Journal of Molecular Sciences 23 (4), 2035, 2022 | 1 | 2022 |
Dongfang LiuRochester Institute of TechnologyVerified email at rit.edu
