HH-suite3 for fast remote homology detection and deep protein annotation M Steinegger, M Meier, M Mirdita, H Vöhringer, SJ Haunsberger, J Söding BMC bioinformatics 20, 1-15, 2019 | 933 | 2019 |
Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis Y Fu, AW Jung, RV Torne, S Gonzalez, H Vöhringer, A Shmatko, LR Yates, ... Nature cancer 1 (8), 800-810, 2020 | 498 | 2020 |
Extensive heterogeneity in somatic mutation and selection in the human bladder ARJ Lawson, F Abascal, THH Coorens, Y Hooks, L O’Neill, C Latimer, ... Science 370 (6512), 75-82, 2020 | 256 | 2020 |
Mutational signatures are jointly shaped by DNA damage and repair NV Volkova, B Meier, V González-Huici, S Bertolini, S Gonzalez, ... Nature communications 11 (1), 2169, 2020 | 197 | 2020 |
Genomic reconstruction of the SARS-CoV-2 epidemic in England HS Vöhringer, T Sanderson, M Sinnott, N De Maio, T Nguyen, R Goater, ... Nature 600 (7889), 506-511, 2021 | 94 | 2021 |
Learning mutational signatures and their multidimensional genomic properties with TensorSignatures H Vöhringer, AV Hoeck, E Cuppen, M Gerstung Nature communications 12 (1), 3628, 2021 | 50 | 2021 |
SpatialData: an open and universal data framework for spatial omics L Marconato, G Palla, KA Yamauchi, I Virshup, E Heidari, T Treis, ... Nature Methods, 1-5, 2024 | 35 | 2024 |
Life without mismatch repair MA Sanders, H Vöhringer, VJ Forster, L Moore, BB Campbell, Y Hooks, ... bioRxiv, 2021.04. 14.437578, 2021 | 26 | 2021 |
Multimodal and spatially resolved profiling identifies distinct patterns of T cell infiltration in nodal B cell lymphoma entities T Roider, MA Baertsch, D Fitzgerald, H Voehringer, BJ Brinkmann, ... Nature Cell Biology 26 (3), 478-489, 2024 | 21 | 2024 |
Genomic reconstruction of the SARS-CoV-2 epidemic across England from September 2020 to May 2021 HS Vöhringer, T Sanderson, M Sinnott, N De Maio, T Nguyen, R Goater, ... medRxiv, 2021.05. 22.21257633, 2021 | 11 | 2021 |
on behalf of The COVID-19 Genomics UK (COG-UK) consortium Lineage-specific growth of SARS-CoV-2 B. 1.1. 7 during the English national lockdown (2020) H Vöhringer, M Sinnott, R Amato, I Martincorena, D Kwiatkowski, ... | 10 | |
Hh-suite3 for fast remote homology detection and deep protein annotation. bioRxiv M Steinegger, M Meier, M Mirdita, H Voehringer, SJ Haunsberger, ... | 7 | 2019 |
Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis. Nature Cancer 1 (8)(July 2020) Y Fu, AW Jung, RV Torne, S Gonzalez, H Vöhringer, A Shmatko, L Yates, ... | 2 | |
Spatial Dissection of the Bone Marrow Microenvironment in Multiple Myeloma By High Dimensional Multiplex Tissue Imaging MA Baertsch, A Brobeil, J Hickey, M Haist, AM Poos, G Lu, W Kuswanto, ... Blood 142, 85, 2023 | 1 | 2023 |
Combining reproduction number and growth rate estimates across an epidemiological Multi-Model Ensemble J Park, LD Bevan, I Melas, RE Moore, H Vöhringer, C Slattery, ... | 1 | |
Semi-supervised Omics Factor Analysis (SOFA) disentangles known sources of variation from latent factors in multi-omics data T Capraz, H Vöhringer, W Huber bioRxiv, 2024.10. 10.617527, 2024 | | 2024 |
A single-cell multi-omic and spatial atlas of B-cell lymphomas reveals differentiation drives intratumor heterogeneity D Fitzgerald, T Roider, MA Baertsch, A Kibler, A Horlova, E Chung, ... bioRxiv, 2023.11. 06.565756, 2023 | | 2023 |
6P Combined single-cell and spatially resolved mapping of the human lymph node ecosystem reveals fundamental principles of lymphoma tissue organization D Hübschmann, L Jopp-Saile, F Czernilofsky, A Mathioudaki, R Lutz, ... Annals of Oncology 34, S188, 2023 | | 2023 |
Single-Cell Multi-Omic and Spatial Analysis of Nodal B Cell Non-Hodgkin Lymphomas Reveals Plasticity in B Cell Maturation As a Driver of Intratumor Heterogeneity D Fitzgerald, T Roider, MA Baertsch, H Vöhringer, M Knoll, B Budeus, ... Blood 140 (Supplement 1), 752-753, 2022 | | 2022 |
Publisher Correction: Genomic reconstruction of the SARS CoV-2 epidemic in England HS Vöhringer, T Sanderson, M Sinnott, N De Maio, T Nguyen, R Goater, ... Nature 606 (7915), E18-E18, 2022 | | 2022 |