| FastQ Screen: A tool for multi-genome mapping and quality control SW Wingett, S Andrews F1000Research 7, 2018 | 1272 | 2018 |
| FastQC S Andrews, F Krueger, A Segonds-Pichon, L Biggins, C Krueger, ... A quality control tool for high throughput sequence data 370, 2010 | 1257 | 2010 |
| Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C B Mifsud, F Tavares-Cadete, AN Young, R Sugar, S Schoenfelder, ... Nature genetics 47 (6), 598-606, 2015 | 1002 | 2015 |
| Lineage-specific genome architecture links enhancers and non-coding disease variants to target gene promoters BM Javierre, OS Burren, SP Wilder, R Kreuzhuber, SM Hill, S Sewitz, ... Cell 167 (5), 1369-1384. e19, 2016 | 959 | 2016 |
| Cell-cycle dynamics of chromosomal organization at single-cell resolution T Nagano, Y Lubling, C Várnai, C Dudley, W Leung, Y Baran, ... Nature 547 (7661), 61-67, 2017 | 699 | 2017 |
| HiCUP: pipeline for mapping and processing Hi-C data S Wingett, P Ewels, M Furlan-Magaril, T Nagano, S Schoenfelder, ... F1000Research 4, 2015 | 535 | 2015 |
| The pluripotent regulatory circuitry connecting promoters to their long-range interacting elements S Schoenfelder, M Furlan-Magaril, B Mifsud, F Tavares-Cadete, R Sugar, ... Genome research 25 (4), 582-597, 2015 | 458 | 2015 |
| CHiCAGO: robust detection of DNA looping interactions in Capture Hi-C data J Cairns, P Freire-Pritchett, SW Wingett, C Várnai, A Dimond, V Plagnol, ... Genome biology 17, 1-17, 2016 | 392 | 2016 |
| Polycomb repressive complex PRC1 spatially constrains the mouse embryonic stem cell genome S Schoenfelder, R Sugar, A Dimond, BM Javierre, H Armstrong, B Mifsud, ... Nature genetics 47 (10), 1179-1186, 2015 | 378 | 2015 |
| Global reorganization of the nuclear landscape in senescent cells T Chandra, PA Ewels, S Schoenfelder, M Furlan-Magaril, SW Wingett, ... Cell reports 10 (4), 471-483, 2015 | 329 | 2015 |
| Lineage-specific dynamic and pre-established enhancer–promoter contacts cooperate in terminal differentiation AJ Rubin, BC Barajas, M Furlan-Magaril, V Lopez-Pajares, MR Mumbach, ... Nature genetics 49 (10), 1522-1528, 2017 | 287 | 2017 |
| Unbiased analysis of potential targets of breast cancer susceptibility loci by Capture Hi-C NH Dryden, LR Broome, F Dudbridge, N Johnson, N Orr, S Schoenfelder, ... Genome research 24 (11), 1854-1868, 2014 | 272 | 2014 |
| Dynamic rewiring of promoter-anchored chromatin loops during adipocyte differentiation R Siersbæk, JGS Madsen, BM Javierre, R Nielsen, EK Bagge, J Cairns, ... Molecular cell 66 (3), 420-435. e5, 2017 | 204 | 2017 |
| Comparison of Hi-C results using in-solution versus in-nucleus ligation T Nagano, C Várnai, S Schoenfelder, BM Javierre, SW Wingett, P Fraser Genome biology 16, 1-13, 2015 | 187 | 2015 |
| The reference epigenome and regulatory chromatin landscape of chronic lymphocytic leukemia R Beekman, V Chapaprieta, N Russiñol, R Vilarrasa-Blasi, ... Nature medicine 24 (6), 868-880, 2018 | 184 | 2018 |
| Single-cell Hi-C for genome-wide detection of chromatin interactions that occur simultaneously in a single cell T Nagano, Y Lubling, E Yaffe, SW Wingett, W Dean, A Tanay, P Fraser Nature protocols 10 (12), 1986-2003, 2015 | 168 | 2015 |
| Hi-C as a tool for precise detection and characterisation of chromosomal rearrangements and copy number variation in human tumours L Harewood, K Kishore, MD Eldridge, S Wingett, D Pearson, ... Genome biology 18, 1-11, 2017 | 156 | 2017 |
| Global reorganisation of cis-regulatory units upon lineage commitment of human embryonic stem cells P Freire-Pritchett, S Schoenfelder, C Várnai, SW Wingett, J Cairns, ... Elife 6, e21926, 2017 | 151 | 2017 |
| FastQC: a quality control tool for high throughput sequence data [Online]. 2010 S Andrews, F Krueger, A Segonds-Pichon, L Biggins, C Krueger, ... | 142 | 2020 |
| FastQ Screen: a tool for multi-genome mapping and quality control. F1000Res 7: 1338 SW Wingett, S Andrews | 126 | 2018 |
Peter FraserDept of Biological Science, Florida State UniversityVerified email at fsu.edu
