| Comprehensive characterization of single-cell full-length isoforms in human and mouse with long-read sequencing L Tian, JS Jabbari, R Thijssen, Q Gouil, SL Amarasinghe, O Voogd, ... Genome biology 22, 1-24, 2021 | 119 | 2021 |
| Systematic assessment of long-read RNA-seq methods for transcript identification and quantification FJ Pardo-Palacios, D Wang, F Reese, M Diekhans, S Carbonell-Sala, ... Nature methods, 1-15, 2024 | 34 | 2024 |
| Benchmarking long-read RNA-sequencing analysis tools using in silico mixtures X Dong, MRM Du, Q Gouil, L Tian, JS Jabbari, R Bowden, PL Baldoni, ... Nature Methods 20 (11), 1810-1821, 2023 | 24 | 2023 |
| A transcriptomic dataset evaluating the effect of radiotherapy injury on cells of skin and soft tissue L Shukla, SA Lee, MRM Du, T Karnezis, ME Ritchie, R Shayan Data in Brief 41, 107828, 2022 | 3 | 2022 |
| Actinobacillus pleuropneumoniae encodes multiple phase-variable DNA methyltransferases that control distinct phasevarions N Nahar, G Tram, FEC Jen, ZN Phillips, LA Weinert, JT Bossé, JS Jabbari, ... Nucleic Acids Research 51 (7), 3240-3260, 2023 | 2 | 2023 |
| scPipe: an extended preprocessing pipeline for comprehensive single-cell ATAC-Seq data integration in R/Bioconductor SL Amarasinghe, P Yang, O Voogd, H Yang, MRM Du, S Su, DV Brown, ... NAR Genomics and Bioinformatics 5 (4), lqad105, 2023 | | 2023 |
