A multimodal deep neural network for human breast cancer prognosis prediction by integrating multi-dimensional data D Sun, M Wang, A Li IEEE/ACM transactions on computational biology and bioinformatics 16 (3 …, 2018 | 305 | 2018 |
PPSP: prediction of PK-specific phosphorylation site with Bayesian decision theory Y Xue, A Li, L Wang, H Feng, X Yao BMC bioinformatics 7, 1-12, 2006 | 259 | 2006 |
Missing value estimation for DNA microarray gene expression data by Support Vector Regression imputation and orthogonal coding scheme X Wang, A Li, Z Jiang, H Feng BMC bioinformatics 7, 1-10, 2006 | 205 | 2006 |
LOCSVMPSI: a web server for subcellular localization of eukaryotic proteins using SVM and profile of PSI-BLAST D Xie, A Li, M Wang, Z Fan, H Feng Nucleic acids research 33 (suppl_2), W105-W110, 2005 | 200 | 2005 |
A novel end-to-end brain tumor segmentation method using improved fully convolutional networks H Li, A Li, M Wang Computers in biology and medicine 108, 150-160, 2019 | 173 | 2019 |
DeepPhos: prediction of protein phosphorylation sites with deep learning F Luo, M Wang, Y Liu, XM Zhao, A Li Bioinformatics 35 (16), 2766-2773, 2019 | 157 | 2019 |
Differentiated cells are more efficient than adult stem cells for cloning by somatic cell nuclear transfer LY Sung, S Gao, H Shen, H Yu, Y Song, SL Smith, CC Chang, K Inoue, ... Nature genetics 38 (11), 1323-1328, 2006 | 143 | 2006 |
Prediction of Nε-acetylation on internal lysines implemented in Bayesian Discriminant Method A Li, Y Xue, C Jin, M Wang, X Yao Biochemical and biophysical research communications 350 (4), 818-824, 2006 | 142 | 2006 |
Integrating genomic data and pathological images to effectively predict breast cancer clinical outcome D Sun, A Li, B Tang, M Wang Computer methods and programs in biomedicine 161, 45-53, 2018 | 125 | 2018 |
A gene signature for breast cancer prognosis using support vector machine X Xu, Y Zhang, L Zou, M Wang, A Li 2012 5th International conference on biomedical engineering and informatics …, 2012 | 115 | 2012 |
A novel heterogeneous network-based method for drug response prediction in cancer cell lines F Zhang, M Wang, J Xi, J Yang, A Li Scientific reports 8 (1), 3355, 2018 | 112 | 2018 |
GPHMM: an integrated hidden Markov model for identification of copy number alteration and loss of heterozygosity in complex tumor samples using whole genome SNP arrays A Li, Z Liu, K Lezon-Geyda, S Sarkar, D Lannin, V Schulz, I Krop, E Winer, ... Nucleic acids research 39 (12), 4928-4941, 2011 | 105 | 2011 |
A bipartite network-based method for prediction of long non-coding RNA–protein interactions M Ge, A Li, M Wang Genomics, Proteomics and Bioinformatics 14 (1), 62-71, 2016 | 104 | 2016 |
PASmiR: a literature-curated database for miRNA molecular regulation in plant response to abiotic stress S Zhang, Y Yue, L Sheng, Y Wu, G Fan, A Li, X Hu, M ShangGuan, C Wei BMC plant biology 13, 1-8, 2013 | 102 | 2013 |
TPGLDA: Novel prediction of associations between lncRNAs and diseases via lncRNA-disease-gene tripartite graph L Ding, M Wang, D Sun, A Li Scientific reports 8 (1), 1065, 2018 | 92 | 2018 |
Predicting long noncoding RNA and protein interactions using heterogeneous network model A Li, M Ge, Y Zhang, C Peng, M Wang BioMed research international 2015 (1), 671950, 2015 | 87 | 2015 |
Improve glioblastoma multiforme prognosis prediction by using feature selection and multiple kernel learning Y Zhang, A Li, C Peng, M Wang IEEE/ACM transactions on computational biology and bioinformatics 13 (5 …, 2016 | 77 | 2016 |
Analytical and clinical validity of wholegenome oligonucleotide array comparative genomic hybridization for pediatric patients with mental retardation and developmental delay B Xiang, A Li, D Valentin, NJ Nowak, H Zhao, P Li American journal of medical genetics Part A 146 (15), 1942-1954, 2008 | 76 | 2008 |
GPDBN: deep bilinear network integrating both genomic data and pathological images for breast cancer prognosis prediction Z Wang, R Li, M Wang, A Li Bioinformatics 37 (18), 2963-2970, 2021 | 71 | 2021 |
NTSMDA: prediction of miRNA–disease associations by integrating network topological similarity D Sun, A Li, H Feng, M Wang Molecular biosystems 12 (7), 2224-2232, 2016 | 71 | 2016 |