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Mandev Gill
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Evolution and epidemic spread of SARS-CoV-2 in Brazil
DS Candido, IM Claro, JG De Jesus, WM Souza, FRR Moreira, ...
Science 369 (6508), 1255-1260, 2020
6482020
Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci
MS Gill, P Lemey, NR Faria, A Rambaut, B Shapiro, MA Suchard
Molecular biology and evolution 30 (3), 713-724, 2013
5112013
Untangling introductions and persistence in COVID-19 resurgence in Europe
P Lemey, N Ruktanonchai, SL Hong, V Colizza, C Poletto, ...
Nature 595 (7869), 713-717, 2021
1372021
A phylodynamic workflow to rapidly gain insights into the dispersal history and dynamics of SARS-CoV-2 lineages
S Dellicour, K Durkin, SL Hong, B Vanmechelen, J Martí-Carreras, MS Gill, ...
Molecular biology and evolution 38 (4), 1608-1613, 2021
912021
Understanding past population dynamics: Bayesian coalescent-based modeling with covariates
MS Gill, P Lemey, SN Bennett, R Biek, MA Suchard
Systematic biology 65 (6), 1041-1056, 2016
682016
Brazil-UK Centre for Arbovirus Discovery, Diagnosis, Genomics and Epidemiology (CADDE) Genomic Network. Evolution and epidemic spread of SARS-CoV-2 in Brazil
DS Candido, IM Claro, JG de Jesus, WM Souza, FRR Moreira, S Dellicour, ...
Science 369 (6508), 1255-1260, 2020
50*2020
Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework
S Dellicour, S Lequime, B Vrancken, MS Gill, P Bastide, K Gangavarapu, ...
Nature communications 11 (1), 1-11, 2020
462020
Transmission dynamics of re-emerging rabies in domestic dogs of rural China
H Tian, Y Feng, B Vrancken, B Cazelles, H Tan, MS Gill, Q Yang, Y Li, ...
PLoS pathogens 14 (12), e1007392, 2018
412018
Relax, keep walking—a practical guide to continuous phylogeographic inference with BEAST
S Dellicour, MS Gill, NR Faria, A Rambaut, OG Pybus, MA Suchard, ...
Molecular biology and evolution 38 (8), 3486-3493, 2021
402021
A relaxed directional random walk model for phylogenetic trait evolution
MS Gill, LS Tung Ho, G Baele, P Lemey, MA Suchard
Systematic biology 66 (3), 299-319, 2017
372017
Online Bayesian phylodynamic inference in BEAST with application to epidemic reconstruction
MS Gill, P Lemey, MA Suchard, A Rambaut, G Baele
Molecular biology and evolution 37 (6), 1832-1842, 2020
282020
Dispersal dynamics of SARS-CoV-2 lineages during the first epidemic wave in New York City
S Dellicour, SL Hong, B Vrancken, A Chaillon, MS Gill, MT Maurano, ...
PLoS pathogens 17 (5), e1009571, 2021
252021
SARS-CoV-2 European resurgence foretold: interplay of introductions and persistence by leveraging genomic and mobility data
P Lemey, N Ruktanonchai, S Hong, V Colizza, C Poletto, ...
192021
On the Use of Phylogeographic Inference to Infer the Dispersal History of Rabies Virus: A Review Study
KD Nahata, N Bollen, MS Gill, M Layan, H Bourhy, S Dellicour, G Baele
Viruses 13 (8), 1628, 2021
152021
Hamiltonian Monte Carlo sampling to estimate past population dynamics using the skygrid coalescent model in a Bayesian phylogenetics framework
G Baele, MS Gill, P Lemey, MA Suchard
Wellcome Open Research 5, 2020
152020
Markov-modulated continuous-time Markov chains to identify site-and branch-specific evolutionary variation in BEAST
G Baele, MS Gill, P Bastide, P Lemey, MA Suchard
Systematic biology 70 (1), 181-189, 2021
142021
Rivers and landscape ecology of a plant virus, Rice yellow mottle virus along the Niger Valley
S Issaka, O Traoré, RDS Longué, A Pinel-Galzi, MS Gill, S Dellicour, ...
Virus Evolution 7 (2), veab072, 2021
102021
YMrCA: Improving Y‐chromosomal ancestor time estimation for DNA kinship research
S Claerhout, S Vanpaemel, MS Gill, LG Antiga, G Baele, R Decorte
Human Mutation 42 (10), 1307-1320, 2021
62021
Early Genomic Surveillance and Phylogeographic Analysis of Getah Virus, a Reemerging Arbovirus, in Livestock in China
J Zhao, S Dellicour, Z Yan, M Veit, MS Gill, WT He, X Zhai, X Ji, ...
Journal of Virology, e01091-22, 2022
52022
Comparative Epidemiology of Rabbit Haemorrhagic Disease Virus Strains from Viral Sequence Data
C Pacioni, RN Hall, T Strive, DSL Ramsey, MS Gill, TG Vaughan
Viruses 15 (1), 21, 2022
32022
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