Daniel Halligan
Daniel Halligan
Fios Genomics
Verified email at fiosgenomics.com
Cited by
Cited by
Evolution of genes and genomes on the Drosophila phylogeny
AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ...
Nature 450 (7167), 203-218, 2007
TGFβ attenuates tumour response to PD-L1 blockade by contributing to exclusion of T cells
S Mariathasan, SJ Turley, D Nickles, A Castiglioni, K Yuen, Y Wang, ...
Nature 554 (7693), 544-548, 2018
Direct estimation of per nucleotide and genomic deleterious mutation rates in Drosophila
C Haag-Liautard, M Dorris, X Maside, S Macaskill, DL Halligan, ...
Nature 445 (7123), 82-85, 2007
Spontaneous mutation accumulation studies in evolutionary genetics
DL Halligan, PD Keightley
Annual Review of Ecology, Evolution, and Systematics 40, 151-172, 2009
Natural selection drives extremely rapid evolution in antiviral RNAi genes
DJ Obbard, FM Jiggins, DL Halligan, TJ Little
Current biology 16 (6), 580-585, 2006
Ubiquitous selective constraints in the Drosophila genome revealed by a genome-wide interspecies comparison
DL Halligan, PD Keightley
Genome research 16 (7), 875-884, 2006
Patterns of intron sequence evolution in Drosophila are dependent upon length and GC content
PR Haddrill, B Charlesworth, DL Halligan, P Andolfatto
Genome biology 6 (8), 1-8, 2005
Estimation of the Spontaneous Mutation Rate per Nucleotide Site in a Drosophila melanogaster Full-Sib Family
PD Keightley, RW Ness, DL Halligan, PR Haddrill
Genetics 196 (1), 313-320, 2014
Reduced efficacy of selection in regions of the Drosophila genome that lack crossing over
PR Haddrill, DL Halligan, D Tomaras, B Charlesworth
Genome biology 8 (2), 1-9, 2007
Patterns of evolutionary constraints in intronic and intergenic DNA of Drosophila
DL Halligan, A Eyre-Walker, P Andolfatto, PD Keightley
Genome research 14 (2), 273-279, 2004
Evidence for pervasive adaptive protein evolution in wild mice
DL Halligan, F Oliver, A Eyre-Walker, B Harr, PD Keightley
PLoS genetics 6 (1), e1000825, 2010
The Relation between Recombination Rate and Patterns of Molecular Evolution and Variation in Drosophila melanogaster
JL Campos, DL Halligan, PR Haddrill, B Charlesworth
Molecular biology and evolution 31 (4), 1010-1028, 2014
Contributions of protein-coding and regulatory change to adaptive molecular evolution in murid rodents
DL Halligan, A Kousathanas, RW Ness, B Harr, L Eöry, TM Keane, ...
PLoS genetics 9 (12), e1003995, 2013
Distributions of selectively constrained sites and deleterious mutation rates in the hominid and murid genomes
L Eőry, DL Halligan, PD Keightley
Molecular Biology and Evolution 27 (1), 177-192, 2010
Evolutionary constraints in conserved nongenic sequences of mammals
PD Keightley, GV Kryukov, S Sunyaev, DL Halligan, DJ Gaffney
Genome Research 15 (10), 1373-1378, 2005
Dominance and Overdominance of Mildly Deleterious Induced Mutations for Fitness Traits in Caenorhabditis elegans
AD Peters, DL Halligan, MC Whitlock, PD Keightley
Genetics 165 (2), 589-599, 2003
Survival prediction in mesothelioma using a scalable Lasso regression model: instructions for use and initial performance using clinical predictors
AC Kidd, M McGettrick, S Tsim, DL Halligan, M Bylesjo, KG Blyth
BMJ Open Respiratory Research 5 (1), e000240, 2018
Faster-X adaptive protein evolution in house mice
A Kousathanas, DL Halligan, PD Keightley
Genetics 196 (4), 1131-1143, 2014
Analysis and implications of mutational variation
PD Keightley, DL Halligan
Genetica 136 (2), 359-369, 2009
Positive and negative selection on noncoding DNA close to protein-coding genes in wild house mice
A Kousathanas, F Oliver, DL Halligan, PD Keightley
Molecular biology and evolution 28 (3), 1183-1191, 2011
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