| Proteoform Suite: Software for constructing, quantifying, and visualizing proteoform families AJ Cesnik, MR Shortreed, LV Schaffer, RA Knoener, BL Frey, M Scalf, ... Journal of proteome research 17 (1), 568-578, 2018 | 46 | 2018 |
| Enhanced protein isoform characterization through long-read proteogenomics RM Miller, BT Jordan, MM Mehlferber, ED Jeffery, C Chatzipantsiou, ... Genome biology 23 (1), 69, 2022 | 40 | 2022 |
| Elucidating Escherichia coli Proteoform Families Using Intact-Mass Proteomics and a Global PTM Discovery Database Y Dai, MR Shortreed, M Scalf, BL Frey, AJ Cesnik, S Solntsev, LV Schaffer, ... Journal of proteome research 16 (11), 4156-4165, 2017 | 35 | 2017 |
| Constructing human proteoform families using intact-mass and top-down proteomics with a multi-protease global post-translational modification discovery database Y Dai, KE Buxton, LV Schaffer, RM Miller, RJ Millikin, M Scalf, BL Frey, ... Journal of proteome research 18 (10), 3671-3680, 2019 | 28 | 2019 |
| Multiplexed sequence-specific capture of chromatin and mass spectrometric discovery of associated proteins Y Dai, J Kennedy-Darling, MR Shortreed, M Scalf, AP Gasch, LM Smith Analytical chemistry 89 (15), 7841-7846, 2017 | 11 | 2017 |
| Targeted quantitation of CFTR protein expression in vivo using immunoprecipitation & parallel reaction monitoring tandem mass spectrometry H Wang, Y Dai, N Clark, L Boeglin, C Woo, R Wooster, G Sun, JC Sullivan Translational Medicine Communications 7, 2022 | 2 | 2022 |
| Developing Proteomic Approaches for DNA-Protein Interactome Discovery and Global Proteoform Elucidation Y Dai The University of Wisconsin-Madison, 2019 | | 2019 |
| Temperature effects on activity of lactate dehydrogenase of the bluegill (Lepomis macrochirus) Y Dai, A Walter Undergraduate Symposia. Journal of the Minnesota Academy of Science 75 (1), 12, 2012 | | 2012 |
