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Zhenxian Zheng
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Symphonizing pileup and full-alignment for deep learning-based long-read variant calling
Z Zheng, S Li, J Su, AWS Leung, TW Lam, R Luo
Nature Computational Science 2 (12), 797-803, 2022
1662022
Applications and potentials of nanopore sequencing in the (epi) genome and (epi) transcriptome era
S Xie, AWS Leung, Z Zheng, D Zhang, C Xiao, R Luo, M Luo, S Zhang
The Innovation 2 (4), 2021
322021
Realistic action recognition with salient foreground trajectories
Y Yi, Z Zheng, M Lin
Expert Systems with Applications 75, 44-55, 2017
282017
Evaluation of Mycobacterium tuberculosis enrichment in metagenomic samples using ONT adaptive sequencing and amplicon sequencing for identification and …
J Su, WW Lui, YL Lee, Z Zheng, GKH Siu, TTL Ng, T Zhang, TTY Lam, ...
Scientific reports 13 (1), 5237, 2023
142023
Clair3-trio: high-performance Nanopore long-read variant calling in family trios with trio-to-trio deep neural networks
J Su, Z Zheng, SS Ahmed, TW Lam, R Luo
Briefings in Bioinformatics 23 (5), bbac301, 2022
122022
ECNano: A cost-effective workflow for target enrichment sequencing and accurate variant calling on 4800 clinically significant genes using a single MinION flowcell
AWS Leung, HCM Leung, CL Wong, ZX Zheng, WW Lui, HM Luk, IFM Lo, ...
BMC Medical Genomics 15 (1), 43, 2022
82022
Single online visual object tracking with enhanced tracking and detection learning
Y Yi, L Luo, Z Zheng
Multimedia Tools and Applications 78, 12333-12351, 2019
82019
ClairS: a deep-learning method for long-read somatic small variant calling
ZX Zheng, J Su, L Chen, YL Lee, TW Lam, R Luo
bioRxiv, 2023.08. 17.553778, 2023
32023
ClusterV-Web: a user-friendly tool for profiling HIV quasispecies and generating drug resistance reports from nanopore long-read data
J Su, S Li, Z Zheng, TW Lam, R Luo
Bioinformatics Advances 4 (1), vbae006, 2024
12024
Boosting variant-calling performance with multi-platform sequencing data using Clair3-MP
H Yu, Z Zheng, J Su, TW Lam, R Luo
BMC bioinformatics 24 (1), 308, 2023
12023
Symphonizing pileup and full-alignment for deep learning-based long-read variant calling
R Luo, Z Zheng, S Li, J Su, AWS Leung, TW Lam
12022
Adaptive updating siamese network with like-hood estimation for surveillance video object tracking
Z Zheng, Y Yi, J Shen, J Zhang
2019 IEEE International Conference on Multimedia & Expo Workshops (ICMEW …, 2019
12019
Repun: an accurate small variant representation unification method for multiple sequencing platforms
Z Zheng, Y Ren, L Chen, AOK Wong, S Li, X Yu, TW Lam, R Luo
Briefings in Bioinformatics 26 (1), bbae613, 2025
2025
Reconstruction of Diploid High-Order 3D Genome Interactions from Long Noisy Concatemers
CL Xiao, Y Chen, ZB Lin, SK Wang, B Wu, L Niu, J Zhong, YM Sun, ...
2024
Clair3-RNA: A deep learning-based small variant caller for long-read RNA sequencing data
Z Zheng, X Yu, L Chen, YL Lee, C Xin, AOK Wong, M Jain, ...
bioRxiv, 2024.11. 17.624050, 2024
2024
Large-scale Dataset and Effective Model for Variant-Disease Associations Extraction
L Chen, J Su, Z Zheng, TW Lam, R Luo
Proceedings of the 14th ACM International Conference on Bioinformatics …, 2023
2023
Nanopore long-read variant calling
Z Zheng
HKU Theses Online (HKUTO), 2023
2023
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