Symphonizing pileup and full-alignment for deep learning-based long-read variant calling Z Zheng, S Li, J Su, AWS Leung, TW Lam, R Luo Nature Computational Science 2 (12), 797-803, 2022 | 166 | 2022 |
Applications and potentials of nanopore sequencing in the (epi) genome and (epi) transcriptome era S Xie, AWS Leung, Z Zheng, D Zhang, C Xiao, R Luo, M Luo, S Zhang The Innovation 2 (4), 2021 | 32 | 2021 |
Realistic action recognition with salient foreground trajectories Y Yi, Z Zheng, M Lin Expert Systems with Applications 75, 44-55, 2017 | 28 | 2017 |
Evaluation of Mycobacterium tuberculosis enrichment in metagenomic samples using ONT adaptive sequencing and amplicon sequencing for identification and … J Su, WW Lui, YL Lee, Z Zheng, GKH Siu, TTL Ng, T Zhang, TTY Lam, ... Scientific reports 13 (1), 5237, 2023 | 14 | 2023 |
Clair3-trio: high-performance Nanopore long-read variant calling in family trios with trio-to-trio deep neural networks J Su, Z Zheng, SS Ahmed, TW Lam, R Luo Briefings in Bioinformatics 23 (5), bbac301, 2022 | 12 | 2022 |
ECNano: A cost-effective workflow for target enrichment sequencing and accurate variant calling on 4800 clinically significant genes using a single MinION flowcell AWS Leung, HCM Leung, CL Wong, ZX Zheng, WW Lui, HM Luk, IFM Lo, ... BMC Medical Genomics 15 (1), 43, 2022 | 8 | 2022 |
Single online visual object tracking with enhanced tracking and detection learning Y Yi, L Luo, Z Zheng Multimedia Tools and Applications 78, 12333-12351, 2019 | 8 | 2019 |
ClairS: a deep-learning method for long-read somatic small variant calling ZX Zheng, J Su, L Chen, YL Lee, TW Lam, R Luo bioRxiv, 2023.08. 17.553778, 2023 | 3 | 2023 |
ClusterV-Web: a user-friendly tool for profiling HIV quasispecies and generating drug resistance reports from nanopore long-read data J Su, S Li, Z Zheng, TW Lam, R Luo Bioinformatics Advances 4 (1), vbae006, 2024 | 1 | 2024 |
Boosting variant-calling performance with multi-platform sequencing data using Clair3-MP H Yu, Z Zheng, J Su, TW Lam, R Luo BMC bioinformatics 24 (1), 308, 2023 | 1 | 2023 |
Symphonizing pileup and full-alignment for deep learning-based long-read variant calling R Luo, Z Zheng, S Li, J Su, AWS Leung, TW Lam | 1 | 2022 |
Adaptive updating siamese network with like-hood estimation for surveillance video object tracking Z Zheng, Y Yi, J Shen, J Zhang 2019 IEEE International Conference on Multimedia & Expo Workshops (ICMEW …, 2019 | 1 | 2019 |
Repun: an accurate small variant representation unification method for multiple sequencing platforms Z Zheng, Y Ren, L Chen, AOK Wong, S Li, X Yu, TW Lam, R Luo Briefings in Bioinformatics 26 (1), bbae613, 2025 | | 2025 |
Reconstruction of Diploid High-Order 3D Genome Interactions from Long Noisy Concatemers CL Xiao, Y Chen, ZB Lin, SK Wang, B Wu, L Niu, J Zhong, YM Sun, ... | | 2024 |
Clair3-RNA: A deep learning-based small variant caller for long-read RNA sequencing data Z Zheng, X Yu, L Chen, YL Lee, C Xin, AOK Wong, M Jain, ... bioRxiv, 2024.11. 17.624050, 2024 | | 2024 |
Large-scale Dataset and Effective Model for Variant-Disease Associations Extraction L Chen, J Su, Z Zheng, TW Lam, R Luo Proceedings of the 14th ACM International Conference on Bioinformatics …, 2023 | | 2023 |
Nanopore long-read variant calling Z Zheng HKU Theses Online (HKUTO), 2023 | | 2023 |