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Annie Chateau
Annie Chateau
Maître de conférences, Université de Montpellier
Verified email at lirmm.fr
Title
Cited by
Cited by
Year
An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies
R Blanc-Mathieu, B Verhelst, E Derelle, S Rombauts, FY Bouget, I Carré, ...
BMC genomics 15 (1), 1-12, 2014
792014
Reconstructing ancestral gene orders using conserved intervals
A Bergeron, M Blanchette, A Chateau, C Chauve
International Workshop on Algorithms in Bioinformatics, 14-25, 2004
712004
Exact approaches for scaffolding
M Weller, A Chateau, R Giroudeau
BMC bioinformatics 16 (14), 1-18, 2015
292015
Ancestral gene synteny reconstruction improves extant species scaffolding
Y Anselmetti, V Berry, C Chauve, A Chateau, E Tannier, S Bérard
BMC genomics 16 (10), 1-13, 2015
262015
A complexity and approximation framework for the maximization scaffolding problem
A Chateau, R Giroudeau
Theoretical Computer Science 595, 92-106, 2015
262015
A CSP approach for metamodel instantiation
A Ferdjoukh, AE Baert, A Chateau, R Coletta, C Nebut
2013 IEEE 25th International Conference on Tools with Artificial …, 2013
242013
Instantiation of Meta-models Constrained with OCL: a CSP Approach
A Ferdjoukh, A Baert, E Bourreau, A Chateau, R Coletta, C Nebut
2015 3rd International Conference on Model-Driven Engineering and Software …, 2015
222015
Computation of perfect DCJ rearrangement scenarios with linear and circular chromosomes
S Bérard, A Chateau, C Chauve, C Paul, E Tannier
Journal of Computational Biology 16 (10), 1287-1309, 2009
212009
Inferring positional homologs with common intervals of sequences
G Blin, A Chateau, C Chauve, Y Gingras
RECOMB Workshop on Comparative Genomics, 24-38, 2006
182006
Aligning the unalignable: bacteriophage whole genome alignments
S Bérard, A Chateau, N Pompidor, P Guertin, A Bergeron, KM Swenson
BMC bioinformatics 17 (1), 1-13, 2016
132016
Complexity and Polynomial-Time Approximation Algorithms around the Scaffolding Problem
A Chateau, R Giroudeau
These proceedings contain the papers that were presented at the First …, 2014
132014
Machine learning meets genome assembly
K Padovani de Souza, JC Setubal, AC Ponce de Leon F. de Carvalho, ...
Briefings in Bioinformatics 20 (6), 2116-2129, 2019
122019
Measuring differences to compare sets of models and improve diversity in MDE
A Ferdjoukh, F Galinier, E Bourreau, A Chateau, C Nebut
ICSEA 2017, 84, 2017
112017
On the complexity of scaffolding problems: from cliques to sparse graphs
M Weller, A Chateau, R Giroudeau
Combinatorial Optimization and Applications, 409-423, 2015
102015
A model-driven approach to generate relevant and realistic datasets
A Ferdjoukh, E Bourreau, A Chateau, C Nebut
SEKE: Software Engineering and Knowledge Engineering, 105-109, 2016
92016
Scaffolding problems revisited: Complexity, approximation and fixed parameter tractable algorithms, and some special cases
M Weller, A Chateau, C Dallard, R Giroudeau
Algorithmica 80 (6), 1771-1803, 2018
82018
On the linearization of scaffolds sharing repeated contigs
M Weller, A Chateau, R Giroudeau
International Conference on Combinatorial Optimization and Applications, 509-517, 2017
82017
Perfect DCJ rearrangement
S Bérard, A Chateau, C Chauve, C Paul, E Tannier
RECOMB International Workshop on Comparative Genomics, 158-169, 2008
82008
Measurement and generation of diversity and meaningfulness in model driven engineering
A Ferdjoukh, F Galinier, E Bourreau, A Chateau, C Nebut
International Journal On Advances in Software 11 (1/2), 131-146, 2018
72018
A general framework for genome rearrangement with biological constraints
P Simonaitis, A Chateau, KM Swenson
Algorithms for molecular biology 14 (1), 1-14, 2019
62019
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Articles 1–20