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Roy Ronen
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DNA Sudoku—harnessing high-throughput sequencing for multiplexed specimen analysis
Y Erlich, K Chang, A Gordon, R Ronen, O Navon, M Rooks, GJ Hannon
Genome research 19 (7), 1243-1253, 2009
1862009
Whole-genome sequencing uncovers the genetic basis of chronic mountain sickness in Andean highlanders
D Zhou, N Udpa, R Ronen, T Stobdan, J Liang, O Appenzeller, HW Zhao, ...
The American Journal of Human Genetics 93 (3), 452-462, 2013
1482013
Learning natural selection from the site frequency spectrum
R Ronen, N Udpa, E Halperin, V Bafna
Genetics 195 (1), 181-193, 2013
1202013
miRNAkey: a software for microRNA deep sequencing analysis
R Ronen, I Gan, S Modai, A Sukacheov, G Dror, E Halperin, N Shomron
Bioinformatics 26 (20), 2615-2616, 2010
1062010
Whole genome sequencing of Ethiopian highlanders reveals conserved hypoxia tolerance genes
N Udpa, R Ronen, D Zhou, J Liang, T Stobdan, O Appenzeller, Y Yin, ...
Genome biology 15, 1-14, 2014
992014
SEQuel: improving the accuracy of genome assemblies
R Ronen, C Boucher, H Chitsaz, P Pevzner
Bioinformatics 28 (12), i188-i196, 2012
802012
Endothelin receptor B, a candidate gene from human studies at high altitude, improves cardiac tolerance to hypoxia in genetically engineered heterozygote mice
T Stobdan, D Zhou, E Ao-Ieong, D Ortiz, R Ronen, I Hartley, Z Gan, ...
Proceedings of the National Academy of Sciences 112 (33), 10425-10430, 2015
522015
Misassembly detection using paired-end sequence reads and optical mapping data
MD Muggli, SJ Puglisi, R Ronen, C Boucher
Bioinformatics 31 (12), i80-i88, 2015
502015
The genetic basis of chronic mountain sickness
R Ronen, D Zhou, V Bafna, GG Haddad
Physiology 29 (6), 403-412, 2014
412014
Senp1 drives hypoxia-induced polycythemia via GATA1 and Bcl-xL in subjects with Monge’s disease
P Azad, HW Zhao, PJ Cabrales, R Ronen, D Zhou, O Poulsen, ...
Journal of Experimental Medicine 213 (12), 2729-2744, 2016
342016
Vaccinia virus infection suppresses the cell microRNA machinery
M Grinberg, S Gilad, E Meiri, A Levy, O Isakov, R Ronen, N Shomron, ...
Archives of virology 157, 1719-1727, 2012
292012
A distributed network for intensive longitudinal monitoring in metastatic triple-negative breast cancer
CA Blau, AB Ramirez, S Blau, CC Pritchard, MO Dorschner, ...
Journal of the National Comprehensive Cancer Network 14 (1), 8-17, 2016
262016
Predicting carriers of ongoing selective sweeps without knowledge of the favored allele
R Ronen, G Tesler, A Akbari, S Zakov, NA Rosenberg, V Bafna
PLoS genetics 11 (9), e1005527, 2015
212015
Novel insight into the non-coding repertoire through deep sequencing analysis
O Isakov, R Ronen, J Kovarsky, A Gabay, I Gan, S Modai, N Shomron
Nucleic acids research 40 (11), e86-e86, 2012
192012
SEQuel: improving the accuracy of genome assemblies. Bioinformatics 28: i188–i196
R Ronen, C Boucher, H Chitsaz, P Pevzner
82012
Pathway-level mutation analysis in primary high-grade serous ovarian cancer and matched brain metastases
R Duchnowska, AM Supernat, R Pęksa, M Łukasiewicz, T Stokowy, ...
Scientific Reports 12 (1), 20537, 2022
52022
Systematic analysis of genetic and pathway determinants of Eribulin sensitivity across 100 human cancer cell lines from the cancer cell line encyclopedia (CCLE)
P Sachdev, R Ronen, J Dutkowski, BA Littlefield
Cancers 14 (18), 4532, 2022
42022
Safety, feasibility, and merits of longitudinal molecular testing of multiple metastatic sites to inform mTNBC patient treatment in the intensive trial of omics in cancer
KA Burton, E Mahen, EQ Konnick, S Blau, MO Dorschner, AB Ramirez, ...
JCO Precision Oncology 6, e2100280, 2022
12022
Haplotype Allele Frequency (HAF) score: predicting carriers of ongoing selective sweeps without knowledge of the adaptive allele
R Ronen, G Tesler, A Akbari, S Zakov, NA Rosenberg, V Bafna
International Conference on Research in Computational Molecular Biology, 276-280, 2015
12015
Abstract LB176: Interrogating the single cell immune checkpoint inhibition atlas to decipher ICI response mechanisms
P Topolewski, A Możwiłło, M Osipowicz, R Ronen, J Dutkowski
Cancer Research 83 (8_Supplement), LB176-LB176, 2023
2023
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Articles 1–20