Patrick A. de Jonge

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Bas E. DutilhMicroverse Cluster, Friedrich Schiller University Jena | Theoretical Biology and BioinformaticsVerified email at uni-jena.de
Franklin L. NobregaAssociate Professor in Microbiology, University of SouthamptonVerified email at soton.ac.uk
Stan J.J. BrounsProfessor of Molecular Microbiology, Delft University of TechnologyVerified email at tudelft.nl
Rob LavigneFull Professor, Laboratory of Gene Technology, University of LeuvenVerified email at kuleuven.be
Torsten P.M. ScheithauerTNOVerified email at amsterdamumc.nl
F. A. Bastiaan von MeijenfeldtVerified email at nioz.nl
Ana Rita CostaDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of TechnologyVerified email at tudelft.nl
Laura van rooijenPhD student bioinformatics, Utrecht universityVerified email at uu.nl
Willem M de VosProfessor @ Microbiology Wageningen Netherlands @Helsinki FinlandVerified email at wur.nl
Anne Linde MakVascular Medicine, Amsterdam University Medical CenterVerified email at amsterdamumc.nl
A.G. (Onno) Holleboom, MD PhD, ass...Internist endocrinologist & vascular medicine, Amsterdam UMC, University of AmsterdamVerified email at amsterdamumc.nl
Laura BosmansAmsterdam UMC, Universiteit van AmsterdamVerified email at amsterdamumc.nl

Patrick A. de Jonge

Department of Experimental Vascular Medicine, Amsterdam UMC

Verified email at amsterdamumc.nl

Bacteriophage Metagenomics Microbiome


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Targeting mechanisms of tailed bacteriophages FL Nobrega, M Vlot, PA de Jonge, LL Dreesens, HJE Beaumont, ... Nature Reviews Microbiology 16 (12), 760-773, 2018	398	2018
Molecular and evolutionary determinants of bacteriophage host range PA de Jonge, FL Nobrega, SJJ Brouns, BE Dutilh Trends in microbiology 27 (1), 51-63, 2019	337	2019
Global phylogeography and ancient evolution of the widespread human gut virus crAssphage RA Edwards, AA Vega, HM Norman, M Ohaeri, K Levi, EA Dinsdale, ... Nature microbiology 4 (10), 1727-1736, 2019	220	2019
Gut virome profiling identifies a widespread bacteriophage family associated with metabolic syndrome PA de Jonge, K Wortelboer, TPM Scheithauer, BJH van den Born, ... Nature Communications 13 (1), 3594, 2022	42	2022
Evolution of BACON Domain Tandem Repeats in crAssphage and Novel Gut Bacteriophage Lineages PA de Jonge, FA von Meijenfeldt, LE van Rooijen, SJJ Brouns, BE Dutilh Viruses 11 (12), 1085, 2019	26	2019
Adsorption sequencing as a rapid method to link environmental bacteriophages to hosts PA de Jonge, FAB von Meijenfeldt, AR Costa, FL Nobrega, SJJ Brouns, ... IScience 23 (9), 2020	22	2020
Phage-microbe dynamics after sterile faecal filtrate transplantation in individuals with metabolic syndrome: a double-blind, randomised, placebo-controlled clinical trial … K Wortelboer, PA de Jonge, TPM Scheithauer, I Attaye, EM Kemper, ... Nature Communications 14 (1), 5600, 2023	7*	2023
Adipose Tissue, Bile Acids, and Gut Microbiome Species Associated With Gallstones After Bariatric Surgery MSS Guman, JB Hoozemans, S Haal, PA de Jonge, Ö Aydin, D Lappa, ... Journal of Lipid Research 63 (11), 2022	5	2022
Development of styrene maleic acid lipid particles as a tool for studies of phage-host interactions PA de Jonge, DJC Smit Sibinga, OA Boright, AR Costa, FL Nobrega, ... Journal of virology 94 (23), 10.1128/jvi. 01559-20, 2020	5	2020
Anaerobutyricum soehngenii Reduces Hepatic Lipogenic Pathways and Increases Intestinal Gluconeogenic Gene Expression in Metabolic-Dysfunction-Associated … AL Mak, QJJ Augustijn, CJF Heymann, S Havik, X Verdoes, ... International Journal of Molecular Sciences 25 (6), 3481, 2024		2024
Phylogeny and disease links of a widespread and ancient gut phage lineage PA de Jonge, BJH van den Born, AH Zwinderman, M Nieuwdorp, ... bioRxiv, 2023.08. 29.555303, 2023		2023
On uncovering and understanding interactions between bacteriophages and bacteria PA de Jonge Utrecht University, 2020		2020

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