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Gholamreza Bidkhori
Gholamreza Bidkhori
Researcher at King's College London
Verified email at kcl.ac.uk
Title
Cited by
Cited by
Year
A pathology atlas of the human cancer transcriptome
M Uhlen, C Zhang, S Lee, E Sjöstedt, L Fagerberg, G Bidkhori, ...
Science 357 (6352), eaan2507, 2017
21602017
Molecular mechanisms behind free radical scavengers function against oxidative stress
F Ahmadinejad, S Geir Møller, M Hashemzadeh-Chaleshtori, G Bidkhori, ...
Antioxidants 6 (3), 51, 2017
1952017
Reconstruction of an integrated genome-scale co-expression network reveals key modules involved in lung adenocarcinoma
G Bidkhori, Z Narimani, S Hosseini Ashtiani, A Moeini, A Nowzari-Dalini, ...
PloS one 8 (7), e67552, 2013
1642013
Metabolic network-based stratification of hepatocellular carcinoma reveals three distinct tumor subtypes
G Bidkhori, R Benfeitas, M Klevstig, C Zhang, J Nielsen, M Uhlen, J Boren, ...
Proceedings of the National Academy of Sciences 115 (50), E11874-E11883, 2018
1072018
Understanding the representative gut microbiota dysbiosis in metformin-treated type 2 diabetes patients using genome-scale metabolic modeling
D Rosario, R Benfeitas, G Bidkhori, C Zhang, M Uhlen, S Shoaie, ...
Frontiers in physiology 9, 775, 2018
632018
Cancer systems biology and modeling: microscopic scale and multiscale approaches
A Masoudi-Nejad, G Bidkhori, SH Ashtiani, A Najafi, JH Bozorgmehr, ...
Seminars in cancer biology 30, 60-69, 2015
512015
Modeling of tumor progression in NSCLC and intrinsic resistance to TKI in loss of PTEN expression
G Bidkhori, A Moeini, A Masoudi-Nejad
PloS one 7 (10), e48004, 2012
462012
TCSBN: a database of tissue and cancer specific biological networks
S Lee, C Zhang, M Arif, Z Liu, R Benfeitas, G Bidkhori, S Deshmukh, ...
Nucleic acids research 46 (D1), D595-D600, 2018
452018
Compositional and functional differences of the mucosal microbiota along the intestine of healthy individuals
S Vaga, S Lee, B Ji, A Andreasson, NJ Talley, L Agréus, G Bidkhori, ...
Scientific reports 10 (1), 1-12, 2020
442020
Genome scale modeling in systems biology: algorithms and resources
A Najafi, G Bidkhori, J H Bozorgmehr, I Koch, A Masoudi-Nejad
Current genomics 15 (2), 130-159, 2014
422014
HomoTarget: a new algorithm for prediction of microRNA targets in Homo sapiens
H Ahmadi, A Ahmadi, S Azimzadeh-Jamalkandi, MA Shoorehdeli, ...
Genomics 101 (2), 94-100, 2013
382013
Characterization of heterogeneous redox responses in hepatocellular carcinoma patients using network analysis
R Benfeitas, G Bidkhori, B Mukhopadhyay, M Klevstig, M Arif, C Zhang, ...
EBioMedicine 40, 471-487, 2019
332019
Tamoxifen-induced apoptosis of MCF-7 cells via GPR30/PI3K/MAPKs interactions: verification by ODE modeling and RNA sequencing
M Rouhimoghadam, S Safarian, JS Carroll, N Sheibani, G Bidkhori
Frontiers in physiology 9, 907, 2018
332018
Multi-omic data interpretation to repurpose subtype specific drug candidates for breast cancer
B Turanli, K Karagoz, G Bidkhori, R Sinha, ML Gatza, M Uhlen, ...
Frontiers in Genetics 10, 420, 2019
322019
Systematic analysis of gut microbiome reveals the role of bacterial folate and homocysteine metabolism in Parkinson’s disease
D Rosario, G Bidkhori, S Lee, J Bedarf, F Hildebrand, E Le Chatelier, ...
Cell reports 34 (9), 108807, 2021
292021
Metabolic network-based identification and prioritization of anticancer targets based on expression data in hepatocellular carcinoma
G Bidkhori, R Benfeitas, E Elmas, MN Kararoudi, M Arif, M Uhlen, ...
Frontiers in physiology 9, 916, 2018
262018
The acute effect of metabolic cofactor supplementation: a potential therapeutic strategy against non‐alcoholic fatty liver disease
C Zhang, E Bjornson, M Arif, A Tebani, A Lovric, R Benfeitas, M Ozcan, ...
Molecular systems biology 16 (4), e9495, 2020
252020
A systems biology approach to reconcile metabolic network models with application to Synechocystis sp. PCC 6803 for biofuel production
R Mohammadi, J Fallah-Mehrabadi, G Bidkhori, J Zahiri, MJ Niroomand, ...
Molecular BioSystems 12 (8), 2552-2561, 2016
202016
Postmortem cortical transcriptomics of Lewy body dementia reveal mitochondrial dysfunction and lack of neuroinflammation
AP Rajkumar, G Bidkhori, S Shoaie, E Clarke, H Morrin, A Hye, G Williams, ...
The American Journal of Geriatric Psychiatry 28 (1), 75-86, 2020
182020
High cell density perfusion culture has a maintained exoproteome and metabolome
L Zamani, M Lundqvist, Y Zhang, M Aberg, F Edfors, G Bidkhori, A Lindahl, ...
Biotechnology Journal 13 (10), 1800036, 2018
152018
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