| Distinct classes of complex structural variation uncovered across thousands of cancer genome graphs K Hadi, X Yao, JM Behr, A Deshpande, C Xanthopoulakis, H Tian, ... Cell 183 (1), 197-210. e32, 2020 | 170 | 2020 |
| A dynamic mechanism for allosteric activation of Aurora kinase A by activation loop phosphorylation EF Ruff, JM Muretta, AR Thompson, EW Lake, S Cyphers, SK Albanese, ... Elife 7, e32766, 2018 | 62 | 2018 |
| A water-mediated allosteric network governs activation of Aurora kinase A S Cyphers, EF Ruff, JM Behr, JD Chodera, NM Levinson Nature chemical biology 13 (4), 402, 2017 | 61 | 2017 |
| Identifying synergistic high-order 3D chromatin conformations from genome-scale nanopore concatemer sequencing AS Deshpande, N Ulahannan, M Pendleton, X Dai, L Ly, JM Behr, ... Nature Biotechnology 40 (10), 1488-1499, 2022 | 59 | 2022 |
| An open library of human kinase domain constructs for automated bacterial expression SK Albanese, DL Parton, M Işık, L Rodríguez-Laureano, SM Hanson, ... Biochemistry 57 (31), 4675-4689, 2018 | 45 | 2018 |
| Toward automated benchmarking of atomistic force fields: neat liquid densities and static dielectric constants from the ThermoML data archive KA Beauchamp, JM Behr, AS Rustenburg, CI Bayly, K Kroenlein, ... The Journal of Physical Chemistry B 119 (40), 12912-12920, 2015 | 41 | 2015 |
| Nanopore sequencing of DNA concatemers reveals higher-order features of chromatin structure N Ulahannan, M Pendleton, AS Deshpande, S Schwenk, JM Behr, X Dai, ... bioRxiv, 2019 | 39 | 2019 |
| Structural variant evolution after telomere crisis SM Dewhurst, X Yao, J Rosiene, H Tian, J Behr, N Bosco, KK Takai, ... Nature Communications 12 (1), 1-17, 2021 | 22 | 2021 |
| Novel patterns of complex structural variation revealed across thousands of cancer genome graphs K Hadi, X Yao, JM Behr, A Deshpande, C Xanthopoulakis, J Rosiene, ... bioRxiv, 2019 | 15 | 2019 |
| Localized modeling of biochemical and flow interactions during cancer cell adhesion J Behr, B Gaskin, C Fu, C Dong, R Kunz PloS one 10 (9), e0136926, 2015 | 11 | 2015 |
| Most large structural variants in cancer genomes can be detected without long reads ZN Choo, JM Behr, A Deshpande, K Hadi, X Yao, H Tian, K Takai, ... Nature Genetics 55 (12), 2139-2148, 2023 | 9 | 2023 |
| Nanopore sequencing of DNA concatemers reveals higher-order features of chromatin structure. bioRxiv 833590 N Ulahannan, M Pendleton, A Deshpande, S Schwenk, JM Behr, X Dai, ... | 9 | 2019 |
| Long-molecule scars of backup DNA repair in BRCA1-and BRCA2-deficient cancers J Setton, K Hadi, ZN Choo, KS Kuchin, H Tian, A Da Cruz Paula, ... Nature 621 (7977), 129-137, 2023 | 4 | 2023 |
| Multiscale modeling of cancer cell adhesion JM Behr | 4 | 2013 |
| Loose ends in cancer genome structure JM Behr, X Yao, K Hadi, H Tian, A Deshpande, J Rosiene, T de Lange, ... bioRxiv, 2021 | 3 | 2021 |
| Mechanism-guided quantification of LINE-1 reveals p53 regulation of both retrotransposition and transcription A Solovyov, JM Behr, D Hoyos, EM Banks, AW Drong, JZ Zhong, ... bioRxiv, 2023.05. 11.539471, 2023 | 1 | 2023 |
| Pathognomonic long molecule footprints of backup repair pathways in homologous recombination deficient cancers J Setton, K Hadi, H Tian, ADC Paula, J Rosiene, ZN Choo, J Behr, X Yao, ... CANCER RESEARCH 82 (4), 2022 | | 2022 |
| Abstract P2-06-04: Pathognomonic long molecule footprints of backup repair pathways in homologous recombination deficient cancers J Setton, K Hadi, H Tian, ADC Paula, J Rosiene, ZN Choo, J Behr, X Yao, ... Cancer Research 82 (4_Supplement), P2-06-04-P2-06-04, 2022 | | 2022 |
| Protein design using expanded ensembles J Behr, P Grinaway, J Chodera F1000Research 5, 2016 | | 2016 |
| Dissecting the Contribution of Kinase Conformational Reorganization Energies to Inhibitor Selectivity SM Hanson, L Rodriguez, JM Behr, A Rizzi, DL Parton, KA Beauchamp, ... Biophysical Journal 110 (3), 545a, 2016 | | 2016 |
Marcin ImielinskiWeill Cornell Medicine, New York Genome CenterVerified email at med.cornell.edu
