Yu Lin
Yu Lin
School of Computing, Australian National University
Verified email at - Homepage
Cited by
Cited by
Assembly of long, error-prone reads using repeat graphs
M Kolmogorov, J Yuan, Y Lin, PA Pevzner
Nature biotechnology 37 (5), 540-546, 2019
Assembly of long error-prone reads using de Bruijn graphs
Y Lin, J Yuan, M Kolmogorov, MW Shen, M Chaisson, PA Pevzner
Proceedings of the National Academy of Sciences 113 (52), E8396-E8405, 2016
In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics
Y Yang, X Liu, C Shen, Y Lin, P Yang, L Qiao
Nature communications 11 (1), 1-11, 2020
MLGO: phylogeny reconstruction and ancestral inference from gene-order data
F Hu, Y Lin, J Tang
BMC bioinformatics 15 (1), 1-6, 2014
A metric for phylogenetic trees based on matching
Y Lin, V Rajan, BME Moret
IEEE/ACM Transactions on Computational Biology and Bioinformatics 9 (4 …, 2011
An exact algorithm to compute the double-cut-and-join distance for genomes with duplicate genes
M Shao, Y Lin, BME Moret
Journal of Computational Biology 22 (5), 425-435, 2015
Estimating true evolutionary distances under the DCJ model
Y Lin, BME Moret
Bioinformatics 24 (13), i114-i122, 2008
Maximum likelihood phylogenetic reconstruction from high-resolution whole-genome data and a tree of 68 eukaryotes
Y Lin, F Hu, J Tang, BME Moret
The Pacific Symposium on Biocomputing 2013, 285-296, 2013
Approximating the edit distance for genomes with duplicate genes under DCJ, insertion and deletion
M Shao, Y Lin
BMC bioinformatics 13 (19), 1-9, 2012
Direct MALDI-TOF MS identification of bacterial mixtures
Y Yang, Y Lin, L Qiao
Analytical chemistry 90 (17), 10400-10408, 2018
GraphBin: refined binning of metagenomic contigs using assembly graphs
V Mallawaarachchi, A Wickramarachchi, Y Lin
Bioinformatics 36 (11), 3307-3313, 2020
Detection and analysis of ancient segmental duplications in mammalian genomes
L Pu, Y Lin, PA Pevzner
Genome research 28 (6), 901-909, 2018
Deriving the probabilities of water loss and ammonia loss for amino acids from tandem mass spectra
S Sun, C Yu, Y Qiao, Y Lin, G Dong, C Liu, J Zhang, Z Zhang, J Cai, ...
Journal of proteome research 7 (01), 202-208, 2008
Modeling dynamic heterogeneous network for link prediction using hierarchical attention with temporal rnn
H Xue, L Yang, W Jiang, Y Wei, Y Hu, Y Lin
Joint European Conference on Machine Learning and Knowledge Discovery in …, 2020
What is the difference between the breakpoint graph and the de Bruijn graph?
Y Lin, S Nurk, PA Pevzner
BMC genomics 15 (6), 1-11, 2014
Fast and accurate phylogenetic reconstruction from high-resolution whole-genome data and a novel robustness estimator
Y Lin, V Rajan, BME Moret
Journal of Computational Biology 18 (9), 1131-1139, 2011
Heuristics for the inversion median problem
V Rajan, AW Xu, Y Lin, KM Swenson, BME Moret
BMC bioinformatics 11 (1), 1-11, 2010
Sorting Signed Permutations by Inversions in O(nlogn) Time
KM Swenson, V Rajan, Y Lin, BME Moret
Annual International Conference on Research in Computational Molecular …, 2009
Morphological stasis masks ecologically divergent coral species on tropical reefs
P Bongaerts, IR Cooke, H Ying, D Wels, S den Haan, ...
Current Biology 31 (11), 2286-2298. e8, 2021
Hurdles hardly have to be heeded
KM Swenson, Y Lin, V Rajan, BME Moret
RECOMB International Workshop on Comparative Genomics, 241-251, 2008
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