Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: a CASP‐CAPRI experiment MF Lensink, S Velankar, A Kryshtafovych, SY Huang, ... Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016 | 166 | 2016 |
Blind prediction of homo‐and hetero‐protein complexes: The CASP13‐CAPRI experiment MF Lensink, G Brysbaert, N Nadzirin, S Velankar, RAG Chaleil, T Gerguri, ... Proteins: Structure, Function, and Bioinformatics 87 (12), 1200-1221, 2019 | 117 | 2019 |
Iterative knowledge-based scoring functions derived from rigid and flexible decoy structures: evaluation with the 2013 and 2014 CSAR benchmarks C Yan, SZ Grinter, BR Merideth, Z Ma, X Zou Journal of chemical information and modeling 56 (6), 1013-1021, 2016 | 28 | 2016 |
TRIC-A channel maintains store calcium handling by interacting with type 2 ryanodine receptor in cardiac muscle X Zhou, KH Park, D Yamazaki, P Lin, M Nishi, Z Ma, L Qiu, T Murayama, ... Circulation research 126 (4), 417-435, 2020 | 21 | 2020 |
First-principles study on stability and magnetism of MAln (n= 2–12; M= Cr, Mn, Fe, Co, Ni, Cu, Zn) clusters Z Ma, B Li Computational and Theoretical Chemistry 1068, 88-96, 2015 | 18 | 2015 |
Performance of MDockPP in CAPRI rounds 28‐29 and 31‐35 including the prediction of water‐mediated interactions X Xu, L Qiu, C Yan, Z Ma, SZ Grinter, X Zou Proteins: Structure, Function, and Bioinformatics 85 (3), 424-434, 2017 | 15 | 2017 |
Predicting protein–ligand binding modes for CELPP and GC3: workflows and insight X Xu, Z Ma, R Duan, X Zou Journal of computer-aided molecular design 33, 367-374, 2019 | 12 | 2019 |
Stabilities of AlnCu (n = 1–19) Clusters and Magnetic Properties of Three Cu-Doped Al Clusters B Li, Z Ma, Q Pan Journal of Cluster Science 27, 1041-1056, 2016 | 9 | 2016 |
MDock: A suite for molecular inverse docking and target prediction Z Ma, X Zou Protein-Ligand Interactions and Drug Design, 313-322, 2021 | 7 | 2021 |
SM‐TF: A structural database of small molecule‐transcription factor complexes X Xu, Z Ma, H Sun, X Zou Journal of computational chemistry 37 (17), 1559-1564, 2016 | 7 | 2016 |
First-Principles Study on Stability and Magnetism of MAln (M = Ni, Cu) (n = 1 - 9) Clusters B Li, X Ren, X Zhang, Z Ma, J Gu, G Li Scientific Research Publishing, 2012 | 7 | 2012 |
Modulating the voltage sensor of a cardiac potassium channel shows antiarrhythmic effects Y Lin, SZ Grinter, Z Lu, X Xu, HZ Wang, H Liang, P Hou, J Gao, C Clausen, ... Proceedings of the National Academy of Sciences 118 (20), e2024215118, 2021 | 6 | 2021 |
Performance of human and server prediction in CAPRI rounds 38‐45 R Duan, L Qiu, X Xu, Z Ma, BR Merideth, CR Shyu, X Zou Proteins: Structure, Function, and Bioinformatics 88 (8), 1110-1120, 2020 | 6 | 2020 |
Rapid identification of inhibitors and prediction of ligand selectivity for multiple proteins: application to protein kinases Z Ma, SY Huang, F Cheng, X Zou The Journal of Physical Chemistry B 125 (9), 2288-2298, 2021 | 3 | 2021 |
MDockServer: An Efficient Docking Platform for Inverse Virtual Screening Z Ma, X Xu, X Zou Biophysical Journal 114 (3), 56a, 2018 | 1 | 2018 |
First-Principles Study on Stability and Magnetism of NimAln (m= 1–3, n= 1–9) Clusters X Zhang, BX Li, Z Ma, J Gu The Scientific World Journal 2013, 2013 | 1 | 2013 |
氮掺杂 C_ (20) 富勒烯的几何结构和稳定性 顾娇娇, 李宝兴, 马志伟 杭州师范大学学报: 自然科学版, 140-144, 2013 | 1 | 2013 |
C_mN_n (m, n= 1-10, 4≤ m+ n≤ 11) 团簇的结构和稳定性研究 马志伟, 李宝兴, 顾娇娇 杭州师范大学学报: 自然科学版 12 (4), 359-364, 2013 | 1 | 2013 |
Predicting the Structure and Energetics of Protein-Ligand Interaction Z Ma University of Missouri-Columbia, 2019 | | 2019 |
Large-scale, automated prediction of protein-ligand binding structures Z Ma, X Xu, R Duan, X Zou APS March Meeting Abstracts 2019, R63. 007, 2019 | | 2019 |