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Sam Shen
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DaDIA: Hybridizing Data-Dependent and Data-Independent Acquisition Modes for Generating High-Quality Metabolomic Data
J Guo, S Shen, S Xing, T Huan
Analytical Chemistry 93 (4), 2669-2677, 2021
422021
ISFrag: De Novo Recognition of In-Source Fragments for Liquid Chromatography–Mass Spectrometry Data
J Guo, S Shen, S Xing, H Yu, T Huan
Analytical Chemistry 93 (29), 10243-10250, 2021
302021
EVA: Evaluation of Metabolic Feature Fidelity Using a Deep Learning Model Trained With Over 25000 Extracted Ion Chromatograms
J Guo, S Shen, S Xing, Y Chen, F Chen, EM Porter, H Yu, T Huan
Analytical Chemistry 93 (36), 12181-12186, 2021
282021
BUDDY: molecular formula discovery via bottom-up MS/MS interrogation
S Xing, S Shen, B Xu, X Li, T Huan
Nature Methods 20 (6), 881-890, 2023
172023
Paramounter: Direct Measurement of Universal Parameters To Process Metabolomics Data in a “White Box”
J Guo, S Shen, T Huan
Analytical Chemistry 94 (10), 4260-4268, 2022
122022
JPA: Joint Metabolic Feature Extraction Increases the Depth of Chemical Coverage for LC-MS-Based Metabolomics and Exposomics
J Guo, S Shen, M Liu, C Wang, B Low, Y Chen, Y Hu, S Xing, H Yu, Y Gao, ...
Metabolites 12 (3), 212, 2022
82022
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