Single-cell sequencing reveals lineage-specific dynamic genetic regulation of gene expression during human cardiomyocyte differentiation R Elorbany, JM Popp, K Rhodes, BJ Strober, K Barr, G Qi, Y Gilad, ... PLoS genetics 18 (1), e1009666, 2022 | 34 | 2022 |
Inference after latent variable estimation for single-cell RNA sequencing data A Neufeld, LL Gao, J Popp, A Battle, D Witten Biostatistics 25 (1), 270-287, 2024 | 21 | 2024 |
Human embryoid bodies as a novel system for genomic studies of functionally diverse cell types K Rhodes, KA Barr, JM Popp, BJ Strober, A Battle, Y Gilad Elife 11, e71361, 2022 | 10 | 2022 |
Negative binomial count splitting for single-cell rna sequencing data A Neufeld, J Popp, LL Gao, A Battle, D Witten arXiv preprint arXiv:2307.12985, 2023 | 7 | 2023 |
Single-cell allele-specific expression analysis reveals dynamic and cell-type-specific regulatory effects G Qi, BJ Strober, JM Popp, R Keener, H Ji, A Battle Nature communications 14 (1), 6317, 2023 | 5 | 2023 |
Uncovering context-specific genetic-regulation of gene expression from single-cell RNA-sequencing using latent-factor models BJ Strober, K Tayeb, J Popp, G Qi, MG Gordon, R Perez, CJ Ye, A Battle bioRxiv, 2022.12. 22.521678, 2022 | 2 | 2022 |
SURGE: uncovering context-specific genetic-regulation of gene expression from single-cell RNA sequencing using latent-factor models BJ Strober, K Tayeb, J Popp, G Qi, MG Gordon, R Perez, CJ Ye, A Battle Genome Biology 25 (1), 28, 2024 | 1 | 2024 |
Cell-type and dynamic state govern genetic regulation of gene expression in heterogeneous differentiating cultures JM Popp, K Rhodes, R Jangi, M Li, KA Barr, K Tayeb, A Battle, Y Gilad bioRxiv, 2024.05. 02.592174, 2024 | | 2024 |