| The MicroArray Quality Control (MAQC) project shows inter-and intraplatform reproducibility of gene expression measurements L Shi, LH Reid, WD Jones, R Shippy, JA Warrington, SC Baker, PJ Collins, ... Nature biotechnology 24 (9), 1151, 2006 | 2343 | 2006 |
| The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models L Shi, G Campbell, WD Jones, F Campagne, Z Wen, SJ Walker, Z Su, ... Nature biotechnology 28 (8), 827, 2010 | 786 | 2010 |
| A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium Z Su, PP Łabaj, S Li, J Thierry-Mieg, D Thierry-Mieg, W Shi, C Wang, ... Nature biotechnology 32 (9), 903, 2014 | 731 | 2014 |
| Rat toxicogenomic study reveals analytical consistency across microarray platforms L Guo, EK Lobenhofer, C Wang, R Shippy, SC Harris, L Zhang, N Mei, ... Nature biotechnology 24 (9), 1162-1169, 2006 | 470 | 2006 |
| The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance C Wang, B Gong, PR Bushel, J Thierry-Mieg, D Thierry-Mieg, J Xu, ... Nature biotechnology 32 (9), 926, 2014 | 426 | 2014 |
| Detecting and correcting systematic variation in large-scale RNA sequencing data S Li, PP Łabaj, P Zumbo, P Sykacek, W Shi, L Shi, J Phan, PY Wu, ... Nature biotechnology 32 (9), 888, 2014 | 330 | 2014 |
| Comparison of RNA-seq and microarray-based models for clinical endpoint prediction W Zhang, Y Yu, F Hertwig, J Thierry-Mieg, W Zhang, D Thierry-Mieg, ... Genome biology 16 (1), 133, 2015 | 303 | 2015 |
| A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages Y Yu, JC Fuscoe, C Zhao, C Guo, M Jia, T Qing, DI Bannon, L Lancashire, ... Nature communications 5 (1), 1-11, 2014 | 291 | 2014 |
| The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies L Shi, WD Jones, RV Jensen, SC Harris, RG Perkins, FM Goodsaid, ... BMC bioinformatics 9 (S9), S10, 2008 | 242 | 2008 |
| Induction of phase I and phase II drug-metabolizing enzyme mRNA, protein, and activity by BHA, ethoxyquin, and oltipraz TM Buetler, EP Gallagher, CH Wang, DL Stahl, JD Hayes, DL Eaton Toxicology and applied pharmacology 135 (1), 45-57, 1995 | 224 | 1995 |
| Dedifferentiation and proliferation of mammalian cardiomyocytes Y Zhang, TS Li, ST Lee, KA Wawrowsky, K Cheng, G Galang, K Malliaras, ... PloS one 5 (9), 2010 | 220 | 2010 |
| In situ hybridization and immunohistochemical analysis of cytochrome P450 1B1 expression in human normal tissues L Muskhelishvili, PA Thompson, DF Kusewitt, C Wang, FF Kadlubar Journal of Histochemistry & Cytochemistry 49 (2), 229-236, 2001 | 196 | 2001 |
| Discovery of molecular mechanisms of traditional Chinese medicinal formula Si-Wu-Tang using gene expression microarray and connectivity map Z Wen, Z Wang, S Wang, R Ravula, L Yang, J Xu, C Wang, Z Zuo, ... PloS one 6 (3), 2011 | 155 | 2011 |
| The CYP3A4* 1B variant is related to the onset of puberty, a known risk factor for the development of breast cancer FF Kadlubar, GS Berkowitz, RR Delongchamp, C Wang, BL Green, ... Cancer Epidemiology and Prevention Biomarkers 12 (4), 327-331, 2003 | 128 | 2003 |
| Assessing technical performance in differential gene expression experiments with external spike-in RNA control ratio mixtures SA Munro, SP Lund, PS Pine, H Binder, DA Clevert, A Conesa, J Dopazo, ... Nature communications 5, 5125, 2014 | 110 | 2014 |
| Small RNA sequencing reveals microRNAs that modulate angiotensin II effects in vascular smooth muscle cells W Jin, MA Reddy, Z Chen, S Putta, L Lanting, M Kato, JT Park, M Chandra, ... Journal of Biological Chemistry 287 (19), 15672-15683, 2012 | 102 | 2012 |
| Spatial distribution of nerve sprouting after myocardial infarction in mice YS Oh, AY Jong, DT Kim, H Li, C Wang, A Zemljic-Harpf, RS Ross, ... Heart Rhythm 3 (6), 728-736, 2006 | 101 | 2006 |
| COHCAP: an integrative genomic pipeline for single-nucleotide resolution DNA methylation analysis CD Warden, H Lee, JD Tompkins, X Li, C Wang, AD Riggs, H Yu, R Jove, ... Nucleic acids research 41 (11), e117-e117, 2013 | 94 | 2013 |
| Multi-class tumor classification by discriminant partial least squares using microarray gene expression data and assessment of classification models Y Tan, L Shi, W Tong, GTG Hwang, C Wang Computational Biology and Chemistry 28 (3), 235-243, 2004 | 94 | 2004 |
| Overview of available methods for diverse RNA-Seq data analyses G Chen, C Wang, TL Shi Science China Life Sciences 54 (12), 1121-1128, 2011 | 91 | 2011 |
