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laurence ettwiller, Ph.D
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The Pfam protein families database
A Bateman, E Birney, L Cerruti, R Durbin, L Etwiller, SR Eddy, ...
Nucleic acids research 30 (1), 276-280, 2002
26352002
A novel function of the proneural factor Ascl1 in progenitor proliferation identified by genome-wide characterization of its targets
DS Castro, B Martynoga, C Parras, V Ramesh, E Pacary, C Johnston, ...
Genes & development 25 (9), 930-945, 2011
3812011
Functional and topological characteristics of mammalian regulatory domains
O Symmons, VV Uslu, T Tsujimura, S Ruf, S Nassari, W Schwarzer, ...
Genome research 24 (3), 390-400, 2014
3772014
Comparative genomics: genome-wide analysis in metazoan eukaryotes
A Ureta-Vidal, L Ettwiller, E Birney
Nature Reviews Genetics 4 (4), 251-262, 2003
2992003
DNA damage is a pervasive cause of sequencing errors, directly confounding variant identification
L Chen, P Liu, TC Evans Jr, LM Ettwiller
Science 355 (6326), 752-756, 2017
2042017
Epigenomic enhancer annotation reveals a key role for NFIX in neural stem cell quiescence
B Martynoga, JL Mateo, B Zhou, J Andersen, A Achimastou, N Urbán, ...
Genes & development 27 (16), 1769-1786, 2013
1612013
Large-scale analysis of the regulatory architecture of the mouse genome with a transposon-associated sensor
S Ruf, O Symmons, VV Uslu, D Dolle, C Hot, L Ettwiller, F Spitz
Nature genetics 43 (4), 379-386, 2011
1522011
Ascl1 coordinately regulates gene expression and the chromatin landscape during neurogenesis
AASF Raposo, FF Vasconcelos, D Drechsel, C Marie, C Johnston, ...
Cell reports 10 (9), 1544-1556, 2015
1512015
An orchestrated gene expression component of neuronal programmed cell death revealed by cDNA array analysis
LW Chiang, JM Grenier, L Ettwiller, LP Jenkins, D Ficenec, J Martin, F Jin, ...
Proceedings of the National Academy of Sciences 98 (5), 2814-2819, 2001
1192001
The light responsive transcriptome of the zebrafish: function and regulation
BD Weger, M Sahinbas, GW Otto, P Mracek, O Armant, D Dolle, K Lahiri, ...
PloS one 6 (2), e17080, 2011
1112011
Trawler: de novo regulatory motif discovery pipeline for chromatin immunoprecipitation
L Ettwiller, B Paten, M Ramialison, E Birney, J Wittbrodt
Nature methods 4 (7), 563-565, 2007
1052007
The cerebellar transcriptome during postnatal development of the Ts1Cje mouse, a segmental trisomy model for Down syndrome
L Dauphinot, R Lyle, I Rivals, MT Dang, RX Moldrich, G Golfier, L Ettwiller, ...
Human molecular genetics 14 (3), 373-384, 2005
1042005
A novel enrichment strategy reveals unprecedented number of novel transcription start sites at single base resolution in a model prokaryote and the gut microbiome
L Ettwiller, J Buswell, E Yigit, I Schildkraut
BMC genomics 17 (1), 1-14, 2016
962016
SMRT-Cappable-seq reveals complex operon variants in bacteria
B Yan, M Boitano, TA Clark, L Ettwiller
Nature communications 9 (1), 1-11, 2018
682018
Transcriptional disruptions in Down syndrome: a case study in the Ts1Cje mouse cerebellum during post‐natal development
MC Potier, I Rivals, G Mercier, L Ettwiller, RX Moldrich, J Laffaire, ...
Journal of neurochemistry 97, 104-109, 2006
602006
De novo genesis of enhancers in vertebrates
MP Eichenlaub, L Ettwiller
PLoS biology 9 (11), e1001188, 2011
572011
The discovery, positioning and verification of a set of transcription-associated motifs in vertebrates
L Ettwiller, B Paten, M Souren, F Loosli, J Wittbrodt, E Birney
Genome biology 6 (12), 1-14, 2005
572005
Characterization of the neural stem cell gene regulatory network identifies OLIG2 as a multifunctional regulator of self-renewal
JL Mateo, DLC van den Berg, M Haeussler, D Drechsel, ZB Gaber, ...
Genome research 25 (1), 41-56, 2015
522015
In vivo validation of a computationally predicted conserved Ath5 target gene set
F Del Bene, L Ettwiller, D Skowronska-Krawczyk, H Baier, JM Matter, ...
PLoS genetics 3 (9), e159, 2007
522007
ThePfamproteinfamiliesdatabase
A Bateman, E Birney, L Cerruti, R Durbin, L Etwiller, SR Eddy, ...
Nucleic Acids Res 32, D138-D141, 2004
402004
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Articles 1–20