Jian Peng
TitleCited byYear
Template-based protein structure modeling using the RaptorX web server
M Källberg, H Wang, S Wang, J Peng, Z Wang, H Lu, J Xu
Nature protocols 7 (8), 1511, 2012
9712012
A community effort to assess and improve drug sensitivity prediction algorithms
JC Costello, LM Heiser, E Georgii, M Gönen, MP Menden, NJ Wang, ...
Nature biotechnology 32 (12), 1202, 2014
3792014
Variational Inference for Crowdsourcing
Q Liu, J Peng, A Ihler
Advances in Neural Information Processing Systems 25, 701-709, 2012
2682012
RaptorX: exploiting structure information for protein alignment by statistical inference
J Peng, J Xu
Proteins: Structure, Function, and Bioinformatics 79 (S10), 161-171, 2011
2672011
Widespread macromolecular interaction perturbations in human genetic disorders
N Sahni, S Yi, M Taipale, JIF Bass, J Coulombe-Huntington, F Yang, ...
Cell 161 (3), 647-660, 2015
2662015
Computational solutions for omics data
B Berger, J Peng, M Singh
Nature reviews genetics 14 (5), 333-346, 2013
2592013
Protein secondary structure prediction using deep convolutional neural fields
S Wang, J Peng, J Ma, J Xu
Scientific reports 6 (1), 1-11, 2016
2502016
A quantitative chaperone interaction network reveals the architecture of cellular protein homeostasis pathways
M Taipale, G Tucker, J Peng, I Krykbaeva, ZY Lin, B Larsen, H Choi, ...
Cell 158 (2), 434-448, 2014
2262014
Selection bias at the heterosexual HIV-1 transmission bottleneck
JM Carlson, M Schaefer, DC Monaco, R Batorsky, DT Claiborne, J Prince, ...
Science 345 (6193), 1254031, 2014
1942014
Conditional neural fields
J Peng, L Bo, J Xu
NIPS 2009, 2009
1892009
A community computational challenge to predict the activity of pairs of compounds
M Bansal, et al
Nature Biotechnology, 2014
1462014
Empower sequence labeling with task-aware neural language model
L Liu, J Shang, X Ren, FF Xu, H Gui, J Peng, J Han
Thirty-Second AAAI Conference on Artificial Intelligence, 2018
1232018
Protein structure alignment beyond spatial proximity
S Wang, J Ma, J Peng, J Xu
Scientific reports 3, 1448, 2013
1112013
A network integration approach for drug-target interaction prediction and computational drug repositioning from heterogeneous information
Y Luo, X Zhao, J Zhou, J Yang, Y Zhang, W Kuang, J Peng, L Chen, ...
Nature communications 8 (1), 1-13, 2017
1102017
A multiple‐template approach to protein threading
J Peng, J Xu
Proteins: Structure, Function, and Bioinformatics 79 (6), 1930-1939, 2011
1082011
Compact integration of multi-network topology for functional analysis of genes
H Cho, B Berger, J Peng
Cell systems 3 (6), 540-548. e5, 2016
107*2016
Low-homology protein threading
J Peng, J Xu
Bioinformatics 26 (12), i294-i300, 2010
972010
Protein 8-class secondary structure prediction using conditional neural fields
Z Wang, F Zhao, J Peng, J Xu
2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2010
882010
Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open …
J Guinney, T Wang, TD Laajala, KK Winner, JC Bare, EC Neto, SA Khan, ...
The Lancet Oncology 18 (1), 132-142, 2017
832017
Compact integration of multi-network topology for functional analysis of genes
H Cho, B Berger, J Peng
Cell systems 3 (6), 540-548. e5, 2016
712016
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Articles 1–20