Leonardo Marino-Ramirez

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David LandsmanNIH NLM NCBIVerified email at ncbi.nlm.nih.gov
I. King JordanProfessor, Director: Bioinformatics Program, School of Biology, Georgia TechVerified email at biology.gatech.edu
Lavanya RishishwarTeam Lead, Pillar BiosciencesVerified email at gatech.edu
John L SpougeSenior Investigator, National Institutes of HealthVerified email at nih.gov
Eugene KooninSenior Investigator, NCBI, NIHVerified email at ncbi.nlm.nih.gov
Olivier BodenreiderSenior Scientist, National Library of MedicineVerified email at nlm.nih.gov
Augusto Valderrama-AguirreUniversidad de Los AndesVerified email at uniandes.edu.co
Roberto Vera Alvarez, PhDNational Center for Biotechnology InformationVerified email at ncbi.nlm.nih.gov
Luz Stella Barrero MenesesPhD Research Scientist, Corporacion Colombiana de Investigacion Agropecuaria - AGROSAVIAVerified email at corpoica.org.co
Ahsan HudaHead of Data Science AI/ML CoE at PfizerVerified email at pfizer.com
Daudi Jjingo, PhDMakerere University, NIH, WelcomeTrust, UVRIVerified email at gatech.edu
Nathan J BowenAssociate Professor, Clark Atlanta UniversityVerified email at cau.edu
Panayiotis TsaparasAssociate Professor, Department of Computer Science and Engineering, University of Ioannina, GreeceVerified email at cs.uoi.gr
Javier Adolfo Hernández-FernándezProfessor of Molecular biology and genetics, Universidad de Bogotá, Jorge Tadeo LozanoVerified email at utadeo.edu.co
Lee S. KatzBioinformatics scientist, Centers for Disease Control and PreventionVerified email at cdc.gov
Joel E KostkaProfessor of Biology and Earth & Atmospheric SciencesVerified email at biology.gatech.edu
JF McDonaldGeorgia Tech, U Georgia, UC Davis, UC San Diego, Iowa StateVerified email at biology.gatech.edu
Anthony V PalumboOak RIdge National LaboratoryVerified email at ornl.gov
Tao DengNational Institutes of HealthVerified email at mail.nih.gov
Lisa CampbellTexas A&M UniversityVerified email at tamu.edu

Leonardo Marino-Ramirez

Stadtman Investigator, NIMHD

Verified email at nih.gov - Homepage

Health Disparities - Genomics - Computational Biology


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Histone structure and nucleosome stability L Mariño-Ramírez, MG Kann, BA Shoemaker, D Landsman Expert review of proteomics 2 (5), 719-729, 2005	417	2005
Origin and evolution of human microRNAs from transposable elements J Piriyapongsa, L Mariño-Ramirez, IK Jordan Genetics 176 (2), 1323-1337, 2007	383	2007
Conservation and coevolution in the scale-free human gene coexpression network IK Jordan, L Mariño-Ramírez, YI Wolf, EV Koonin Molecular biology and evolution 21 (11), 2058-2070, 2004	234	2004
Evolutionary significance of gene expression divergence IK Jordan, L Mariño-Ramírez, EV Koonin Gene 345 (1), 119-126, 2005	161	2005
Statistical analysis of over‐represented words in human promoter sequences L Mariño‐Ramírez, JL Spouge, GC Kanga, D Landsman Nucleic acids research 32 (3), 949-958, 2004	150	2004
Transposable elements donate lineage-specific regulatory sequences to host genomes L Marino-Ramirez, KC Lewis, D Landsman, IK Jordan Cytogenetic and genome research 110 (1-4), 333-341, 2005	130	2005
HistoneDB 2.0: a histone database with variants—an integrated resource to explore histones and their variants EJ Draizen, AK Shaytan, L Mariño-Ramírez, PB Talbert, D Landsman, ... Database 2016, 2016	118	2016
TPMCalculator: one-step software to quantify mRNA abundance of genomic features R Vera Alvarez, LS Pongor, L Mariño-Ramírez, D Landsman Bioinformatics 35 (11), 1960-1962, 2019	107	2019
Widespread positive selection in synonymous sites of mammalian genes AM Resch, L Carmel, L Mariño-Ramírez, AY Ogurtsov, SA Shabalina, ... Molecular biology and evolution 24 (8), 1821-1831, 2007	103	2007
Global similarity and local divergence in human and mouse gene co-expression networks P Tsaparas, L Mariño-Ramírez, O Bodenreider, EV Koonin, IK Jordan BMC evolutionary biology 6 (1), 1-13, 2006	101	2006
Genetic ancestry, admixture and health determinants in Latin America ET Norris, L Wang, AB Conley, L Rishishwar, L Mariño-Ramírez, ... BMC genomics 19 (8), 75-87, 2018	90	2018
Evolutionary rates and patterns for human transcription factor binding sites derived from repetitive DNA N Polavarapu, L Mariño-Ramírez, D Landsman, JF McDonald, IK Jordan BMC genomics 9, 1-10, 2008	90	2008
Mammalian-wide interspersed repeat (MIR)-derived enhancers and the regulation of human gene expression D Jjingo, AB Conley, J Wang, L Mariño-Ramírez, VV Lunyak, IK Jordan Mobile DNA 5 (1), 1-12, 2014	80	2014
Epigenetic histone modifications of human transposable elements: genome defense versus exaptation A Huda, L Mariño-Ramírez, IK Jordan Mobile DNA 1 (1), 1-12, 2010	80	2010
Benchmarking computational tools for polymorphic transposable element detection L Rishishwar, L Mariño-Ramírez, IK Jordan Briefings in Bioinformatics 18 (6), 908-918, 2017	75	2017
The histone database: a comprehensive resource for histones and histone fold‐containing proteins L Mariño‐Ramírez, B Hsu, AD Baxevanis, D Landsman Proteins: Structure, Function, and Bioinformatics 62 (4), 838-842, 2006	70	2006
Global regulation by the yeast Spt10 protein is mediated through chromatin structure and the histone upstream activating sequence elements PR Eriksson, G Mendiratta, NB McLaughlin, TG Wolfsberg, ... Molecular and cellular biology 25 (20), 9127-9137, 2005	70	2005
Genome sequences for six Rhodanobacter strains, isolated from soils and the terrestrial subsurface, with variable denitrification capabilities JE Kostka, SJ Green, L Rishishwar, O Prakash, LS Katz, ... Journal of Bacteriology 194 (16), 4461-4462, 2012	66	2012
The Physalis peruviana leaf transcriptome: assembly, annotation and gene model prediction GA Garzón-Martínez, Z Zhu, D Landsman, LS Barrero, L Mariño-Ramírez BMC genomics 13 (1), 1-12, 2012	64	2012
The Histone Database: an integrated resource for histones and histone fold-containing proteins L Mariño-Ramírez, KM Levine, M Morales, S Zhang, RT Moreland, ... Database 2011, 2011	60	2011

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