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Varun Shamanna
Varun Shamanna
Senior Bioinformatician, Central Research Laboratory
Verified email at crlkims.com
Title
Cited by
Cited by
Year
High-Resolution Genomic Profiling of Carbapenem-Resistant Klebsiella pneumoniae Isolates: A Multicentric Retrospective Indian Study
G Nagaraj, V Shamanna, V Govindan, S Rose, D Sravani, KP Akshata, ...
Clinical Infectious Diseases 73 (Supplement_4), S300-S307, 2021
282021
Circulation of Third-Generation Cephalosporin Resistant Salmonella Typhi in Mumbai, India
S Argimón, G Nagaraj, V Shamanna, D Sravani, AK Vasanth, A Prasanna, ...
Clinical Infectious Diseases 74 (12), 2234-2237, 2022
172022
Overcoming data bottlenecks in genomic pathogen surveillance
AO Afolayan, JF Bernal, JM Gayeta, ML Masim, V Shamanna, M Abrudan, ...
Clinical Infectious Diseases 73 (Supplement_4), S267-S274, 2021
142021
Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes
ME Carey, ZA Dyson, DJ Ingle, A Amir, MK Aworh, MA Chattaway, ...
Elife 12, e85867, 2023
82023
Global diversity and antimicrobial resistance of typhoid fever pathogens: insights from 13,000 Salmonella Typhi genomes
ME Carey, ZA Dyson, DJ Ingle, A Amir, MK Aworh, MA Chattaway, ...
medRxiv, 2022.12. 28.22283969, 2022
72022
NIHR Global Health Research Unit on Genomic Surveillance of Antimicrobial Resistance. 2021. Complexity of genomic epidemiology of carbapenem-resistant Klebsiella pneumoniae …
SY Saavedra, JF Bernal, E Montilla-Escudero, SA Arévalo, DA Prada, ...
Clin Infect Dis 73, S290-S299, 0
6
Molecular dissection of carbapenem-resistant Acinetobacter baumannii circulating in Indian hospitals using Whole Genome Sequencing
S Rose, V Shamanna, A Underwood, G Nagaraj, A Prasanna, V Govindan, ...
bioRxiv, 2021.07. 30.454432, 2021
42021
Molecular characterisation of carbapenem-resistant Klebsiella pneumoniae clinical isolates: preliminary experience from a tertiary care teaching hospital in the …
M Bhatia, V Shamanna, G Nagaraj, D Sravani, P Gupta, BJ Omar, ...
Transactions of The Royal Society of Tropical Medicine and Hygiene 116 (7 …, 2022
22022
Assessment of in vitro colistin susceptibility of carbapenem-resistant clinical Gram-negative bacterial isolates using four commercially available systems & Whole-genome …
M Bhatia, V Shamanna, G Nagaraj, P Gupta, BJ Omar, R Rohilla, ...
Diagnostic Microbiology and Infectious Disease 108 (3), 116155, 2024
12024
Whole-genome sequencing of Omicron identified multiple outbreaks and introduction events in India during November 2021 and January 2022
SD Marathe, V Shamanna, G Nagaraj, S Nischita, M Bhaskaran, ...
medRxiv, 2022.04. 20.22270880, 2022
12022
Comparison of phenotypic and Whole Genome Sequencing (WGS)-derived antimicrobial resistance profiles of Salmonella typhi isolated from Blood cultures
AK Bari, S Geetha, V Shamanna, S Darmavaram, V Govindan
International Journal of Infectious Diseases 116, S17, 2022
12022
Diversity, functional classification and genotyping of SHV β-lactamases in Klebsiella pneumoniae
KK Tsang, MMC Lam, RR Wick, KL Wyres, MA Bachman, S Baker, K Barry, ...
bioRxiv, 2024.04. 05.587953, 2024
2024
Geographical distribution, disease association and diversity of Klebsiella pneumoniae KL and O antigens in India: roadmap for vaccine development
V Shamanna, S Srinivas, N Couto, G Nagaraj, SP Sajankila, ...
bioRxiv, 2024.03. 15.585133, 2024
2024
Novel multidrug-resistant sublineages of Staphylococcus aureus clonal complex 22 discovered in India
MI Abrudan, V Shamanna, A Prasanna, A Underwood, S Argimón, ...
Msphere 8 (5), e00185-23, 2023
2023
An insight into whole genome sequencing data of methicillin-resistant Staphylococcus aureus circulating in a teaching hospital in North India
M Bhatia, V Shamanna, G Nagaraj, D Sravani, P Gupta, BJ Omar, A Singh, ...
Indian Journal of Medical Microbiology 44, 100365, 2023
2023
A DECADE OF STUDY ON K. PNEUMONIAE CAPSULAR TYPE DISTRIBUTION IN INDIA–REVEALS HIGH DIVERSITY AND ITS IMPLICATION IN VACCINE DEVELOPMENT
N Geetha, V Shamanna, M Bhaskaran, S Marathe, KL Ravikumar
International Journal of Infectious Diseases 130, S2, 2023
2023
WHOLE GENOME SEQUENCING REVEALS DIVERSE MODES OF CARBAPENEMASE GENE DISSEMINATION IN INDIAN KLEBSIELLA PNEUMONIAE CLINICAL ISOLATES
V Shamanna, A Underwood, S Argimón, A Prasanna, G Nagaraj, ...
International Journal of Infectious Diseases 130, S71-S72, 2023
2023
GENOMIC DATA SETS DESCRIBING GENETIC BACKGROUND AND CIRCULATING LINEAGES OF NEISSERIA GONORRHOEAE IN BANGALORE, INDIA
N Geetha, J Shwetha, S Chunchanur, V Shamanna, M Bhaskaran
International Journal of Infectious Diseases 130, S85-S86, 2023
2023
DIVERSE GENETIC BACKGROUND OF MULTIDRUG RESISTANT PSEUDOMONAS AERUGINOSA CIRCULATING IN INDIA
N Geetha, M Bhaskaran, V Shamanna, S Marathe, KL Ravikumar
International Journal of Infectious Diseases 130, S1-S2, 2023
2023
GENETIC VARIATION IN PENICILLIN-BINDING GENES 1A, 2B, AND 2X OF STREPTOCOCCUS PNEUMONIAE CAUSING INVASIVE PNEUMOCOCCAL DISEASE IN INDIAN CHILDREN
M Bhaskaran, G Nagaraj, S Marathe, V Shamanna, KL Ravikumar
International Journal of Infectious Diseases 130, S5, 2023
2023
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