| Elp2 mutations perturb the epitranscriptome and lead to a complex neurodevelopmental phenotype M Kojic, T Gawda, M Gaik, A Begg, A Salerno-Kochan, ND Kurniawan, ... Nature communications 12 (1), 2678, 2021 | 35 | 2021 |
| Conserved epigenetic regulatory logic infers genes governing cell identity WJ Shim, E Sinniah, J Xu, B Vitrinel, M Alexanian, G Andreoletti, S Shen, ... Cell systems 11 (6), 625-639. e13, 2020 | 33 | 2020 |
| Integrating single-cell genomics pipelines to discover mechanisms of stem cell differentiation S Shen, Y Sun, M Matsumoto, WJ Shim, E Sinniah, SB Wilson, T Werner, ... Trends in Molecular Medicine 27 (12), 1135-1158, 2021 | 9 | 2021 |
| PDGF-AB reduces myofibroblast differentiation without increasing proliferation after myocardial infarction RD Hume, T Deshmukh, T Doan, WJ Shim, S Kanagalingam, ... Basic to Translational Science 8 (6), 658-674, 2023 | 7 | 2023 |
| A transposable element into the human long noncoding RNA CARMEN is a switch for cardiac precursor cell specification I Plaisance, P Chouvardas, Y Sun, M Nemir, P Aghagolzadeh, F Aminfar, ... Cardiovascular research 119 (6), 1361-1376, 2023 | 5 | 2023 |
| Inferring cell diversity in single cell data using consortium-scale epigenetic data as a biological anchor for cell identity Y Sun, WJ Shim, S Shen, E Sinniah, D Pham, Z Su, D Mizikovsky, ... Nucleic Acids Research 51 (11), e62-e62, 2023 | 3 | 2023 |
| Repressive epigenetic mechanisms, such as the H3K27me3 histone modification, were predicted to affect muscle gene expression and its mineral content in Nelore cattle J Afonso, WJ Shim, M Boden, MRS Fortes, WJ da Silva Diniz, AO de Lima, ... Biochemistry and Biophysics Reports 33, 101420, 2023 | 2 | 2023 |
| An integrated cell barcoding and computational analysis pipeline for scalable analysis of differentiation at single-cell resolution S Shen, T Werner, Y Sun, WJ Shim, S Lukowski, S Andersen, HS Chiu, ... bioRxiv, 2022.10. 12.511862, 2022 | 2 | 2022 |
| Epigenetic repression of genes associated with ribeye area of Nelore cattle. J Afonso, MRS Fortes, WJ Shim, TF Cardoso, JJ Bruscadin, AO de Lima, ... | | 2023 |
| Human hearts have an intrinsic regenerative potential following myocardial infarction S Lal, R Hume, J Warwick, WJ Shim, C Malecki, M Li, D Harney, ... | | 2023 |
| Disease modeling utilizing human pluripotent stem cell-derived cardiomyocytes and physiological characterization Y Cao, MA Redd, WJ Shim, C Fang, H Chiu, DR Azofeifa, U Thomas, ... Journal of Pharmacological and Toxicological Methods 123, 2023 | | 2023 |
| H3K27me3 predicted regulation of gene expression linked to calcium quantification in Nelore muscle J Afonso, WJ Shim, M Boden, N Palpant, MRS Fortes, WJS Diniz, ... Proceedings of 12th World Congress on Genetics Applied to Livestock …, 2022 | | 2022 |
| Identifying genetic regulators of cell fate through computational analysis of epigenetic repression WJ Shim | | 2021 |
| Sortilin localisation in the rat retina during early postnatal development WJ Shim, SI Firth | | 2009 |
