| Principles of RNA processing from analysis of enhanced CLIP maps for 150 RNA binding proteins EL Van Nostrand, GA Pratt, BA Yee, EC Wheeler, SM Blue, J Mueller, ... Genome biology 21, 1-26, 2020 | 146 | 2020 |
| Transcriptome-wide profiles of circular RNA and RNA-binding protein interactions reveal effects on circular RNA biogenesis and cancer pathway expression TLH Okholm, S Sathe, SS Park, AB Kamstrup, AM Rasmussen, A Shankar, ... Genome medicine 12, 1-22, 2020 | 127 | 2020 |
| Transcriptome-wide identification of RNA-binding protein binding sites using seCLIP-seq SM Blue, BA Yee, GA Pratt, JR Mueller, SS Park, AA Shishkin, AC Starner, ... Nature protocols 17 (5), 1223-1265, 2022 | 29 | 2022 |
| Integrative RNA-omics discovers GNAS alternative splicing as a phenotypic driver of splicing factor-mutant neoplasms EC Wheeler, S Vora, D Mayer, AG Kotini, M Olszewska, SS Park, ... Cancer Discovery, 2021 | 22 | 2021 |
| Scalable and deep profiling of mRNA targets for individual microRNAs with chimeric eCLIP SA Manakov, AA Shishkin, BA Yee, KA Shen, DC Cox, SS Park, ... BioRxiv, 2022.02. 13.480296, 2022 | 11 | 2022 |
| HydRA: Deep-learning models for predicting RNA-binding capacity from protein interaction association context and protein sequence W Jin, KW Brannan, K Kapeli, SS Park, HQ Tan, ML Gosztyla, ... Molecular Cell 83 (14), 2595-2611. e11, 2023 | 5 | 2023 |
| Discovery and functional interrogation of SARS-CoV-2 protein-RNA interactions JS Xiang, JR Mueller, EC Luo, BA Yee, D Schafer, JC Schmok, FE Tan, ... Research Square, 2022 | 5 | 2022 |
| Discovery and functional interrogation of the virus and host RNA interactome of SARS-Cov-2 proteins JS Xiang, JR Mueller, EC Luo, B Yee, D Schafer, JC Schmok, FE Tan, ... | 2 | 2021 |
| circHIPK3 nucleates IGF2BP2 and functions as a competing endogenous RNA TLH Okholm, AB Kamstrup, MM Nielsen, AK Hollensen, ML Graversgaard, ... bioRxiv, 2023 | 1 | 2023 |
| Automated, miniaturized, and scalable screening of healthcare workers, first responders, and students for SARS-CoV-2 in San Diego County SC Morgan, S Aigner, C Anderson, P Belda-Ferre, P De Hoff, CA Marotz, ... medRxiv, 2021.06. 25.21257885, 2021 | 1 | 2021 |
| Expanded palette of RNA base editors for comprehensive RBP-RNA interactome studies HC Medina-Munoz, E Kofman, P Jagannatha, EA Boyle, T Yu, KL Jones, ... Nature Communications 15 (1), 875, 2024 | | 2024 |
Gene Yeo PhD MBAProfessor of Cellular and Molecular Medicine at UC San DiegoVerified email at ucsd.edu
