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Joseph Tsui Lok Hei
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Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa
R Viana, S Moyo, DG Amoako, H Tegally, C Scheepers, CL Althaus, ...
Nature 603 (7902), 679-686, 2022
15632022
Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA. 1
JLH Tsui, JT McCrone, B Lambert, S Bajaj, RPD Inward, P Bosetti, ...
Science 381 (6655), 336-343, 2023
322023
Genomic epidemiology of SARS-CoV-2 under an elimination strategy in Hong Kong
H Gu, R Xie, DC Adam, JLH Tsui, DK Chu, LDJ Chang, SSY Cheuk, ...
Nature Communications 13 (1), 736, 2022
292022
Dispersal patterns and influence of air travel during the global expansion of SARS-CoV-2 variants of concern
H Tegally, E Wilkinson, JLH Tsui, M Moir, D Martin, AF Brito, M Giovanetti, ...
Cell 186 (15), 3277-3290. e16, 2023
272023
SARS-CoV-2 under an elimination strategy in Hong Kong
H Gu, R Xie, DC Adam, JLH Tsui, DK Chu, LDJ Chang, SSY Cheuk, ...
medRxiv, 2021
102021
Global expansion of SARS-CoV-2 variants of concern: dispersal patterns and influence of air travel
H Tegally, E Wilkinson, D Martin, M Moir, A Brito, M Giovanetti, K Khan, ...
medRxiv, 2022
72022
Synchrony of Bird Migration with Global Dispersal of Avian Influenza Reveals Exposed Bird Orders
Q Yang, B Wang, P Lemey, L Dong, T Mu, RA Wiebe, F Guo, NS Trovão, ...
Nature communications 15 (1), 1126, 2024
32024
Robust expansion of phylogeny for fast-growing genome sequence data
Y Ye, MH Shum, JL Tsui, G Yu, DK Smith, H Zhu, JT Wu, Y Guan, ...
PLoS computational biology 20 (2), e1011871, 2024
22024
COVID-19 pandemic interventions reshaped the global dispersal of seasonal influenza viruses
Z Chen, JLH Tsui, B Gutierrez, S Busch Moreno, L du Plessis, X Deng, ...
Science 386 (6722), eadq3003, 2024
12024
Impacts of climate change-related human migration on infectious diseases
JLH Tsui, RE Pena, M Moir, RPD Inward, E Wilkinson, JE San, ...
Nature Climate Change 14 (8), 793-802, 2024
12024
Quantifying the value of viral genomics when inferring who infected whom in the 2014–16 Ebola virus outbreak in Guinea
A Robert, J Tsui Lok Hei, CH Watson, PS Gsell, Y Hall, A Rambaut, ...
Virus evolution 9 (1), vead007, 2023
12023
COVID-19 testing and reporting behaviours in England across different sociodemographic groups: a population-based study using testing data and data from community prevalence …
S Bajaj, S Chen, R Creswell, R Naidoo, JLH Tsui, O Kolade, G Nicholson, ...
The Lancet Digital Health 6 (11), e778-e790, 2024
2024
Routes of importation and spatial dynamics of SARS-CoV-2 variants during localized interventions in Chile
B Gutierrez, JLH Tsui, G Pullano, M Mazzoli, K Gangavarapu, RPD Inward, ...
PNAS Nexus 3 (11), pgae483, 2024
2024
Optimal disease surveillance with graph-based Active Learning
JLH Tsui, M Zhang, P Sambaturu, S Busch-Moreno, MA Suchard, ...
medRxiv, 2024.06. 21.24309284, 2024
2024
Disruption of seasonal influenza circulation and evolution during two pandemic events in Southeastern Asia: contrasting the role of human movement and pathogen competition
Z Chen, JLH Tsui, J Cai, C Viboud, L Plessis, P Lemey, MUG Kraemer, ...
medRxiv, 2024.06. 19.24309151, 2024
2024
Disentangling seasonal introduction and establishment risk of dengue in Africa
J Poongavanan, J Lourenco, JLH Tsui, V Colizza, Y Ramphal, C Baxter, ...
medRxiv, 2024.05. 07.24306997, 2024
2024
Understanding COVID-19 testing behaviour in England through a sociodemographic lens
S Bajaj, S Chen, R Creswell, R Naidoo, JLH Tsui, O Kolade, G Nicholson, ...
medRxiv, 2023.10. 26.23297608, 2023
2023
Synchrony of Bird Migration with Avian Influenza Global Spread; Implications for Vulnerable Bird Orders
Q Yang, B Wang, P Lemey, L Dong, T Mu, RA Wiebe, F Guo, NS Trovão, ...
bioRxiv, 2023.05. 22.541648, 2023
2023
COVID-19 pandemic re-shaped the global dispersal of seasonal influenza viruses
Z Chen, JLH Tsui, B Gutierrez, SB Moreno, L Plessis, X Deng, J Cai, ...
medRxiv, 2023.12. 20.23300299, 2023
2023
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