Subspecific origin and haplotype diversity in the laboratory mouse H Yang, JR Wang, JP Didion, RJ Buus, TA Bell, CE Welsh, F Bonhomme, ... Nature genetics 43 (7), 648-655, 2011 | 455 | 2011 |
The genome architecture of the Collaborative Cross mouse genetic reference population Collaborative Cross Consortium Genetics 190 (2), 389-401, 2012 | 421 | 2012 |
Genetic analysis of complex traits in the emerging Collaborative Cross DL Aylor, W Valdar, W Foulds-Mathes, RJ Buus, RA Verdugo, RS Baric, ... Genome research 21 (8), 1213-1222, 2011 | 357 | 2011 |
Analyses of allele-specific gene expression in highly divergent mouse crosses identifies pervasive allelic imbalance JJ Crowley, V Zhabotynsky, W Sun, S Huang, IK Pakatci, Y Kim, JR Wang, ... Nature genetics 47 (4), 353-360, 2015 | 203 | 2015 |
Modeling host genetic regulation of influenza pathogenesis in the collaborative cross MT Ferris, DL Aylor, D Bottomly, AC Whitmore, LD Aicher, TA Bell, ... PLoS pathogens 9 (2), e1003196, 2013 | 197 | 2013 |
Evidence for extensive horizontal gene transfer from the draft genome of a tardigrade TC Boothby, JR Tenlen, FW Smith, JR Wang, KA Patanella, ... Proceedings of the National Academy of Sciences 112 (52), 15976-15981, 2015 | 171 | 2015 |
Status and access to the Collaborative Cross population CE Welsh, DR Miller, KF Manly, J Wang, L McMillan, G Morahan, R Mott, ... Mammalian Genome 23, 706-712, 2012 | 142 | 2012 |
FMLRC: Hybrid long read error correction using an FM-index JR Wang, J Holt, L McMillan, CD Jones BMC bioinformatics 19, 1-11, 2018 | 102 | 2018 |
Widespread introgression across a phylogeny of 155 Drosophila genomes A Suvorov, BY Kim, J Wang, EE Armstrong, D Peede, ERR D’agostino, ... Current Biology 32 (1), 111-123. e5, 2022 | 79 | 2022 |
Highly contiguous assemblies of 101 drosophilid genomes BY Kim, JR Wang, DE Miller, O Barmina, E Delaney, A Thompson, ... Elife 10, e66405, 2021 | 70 | 2021 |
Tumor-intrinsic and-extrinsic determinants of response to blinatumomab in adults with B-ALL Y Zhao, I Aldoss, C Qu, JC Crawford, Z Gu, EK Allen, AE Zamora, ... Blood 137 (4), 471-484, 2021 | 58 | 2021 |
Comparative analysis and visualization of multiple collinear genomes JR Wang, FPM de Villena, L McMillan BMC bioinformatics 13, 1-14, 2012 | 52 | 2012 |
Imputation of single-nucleotide polymorphisms in inbred mice using local phylogeny JR Wang, FPM de Villena, HA Lawson, JM Cheverud, GA Churchill, ... Genetics 190 (2), 449-458, 2012 | 45 | 2012 |
Genetic architecture of skewed X inactivation in the laboratory mouse JD Calaway, AB Lenarcic, JP Didion, JR Wang, JB Searle, L McMillan, ... PLoS Genetics 9 (10), e1003853, 2013 | 44 | 2013 |
A vertebrate adaptive radiation is assembled from an ancient and disjunct spatiotemporal landscape EJ Richards, JA McGirr, JR Wang, ME St. John, JW Poelstra, MJ Solano, ... Proceedings of the National Academy of Sciences 118 (20), e2011811118, 2021 | 28 | 2021 |
Long transposon-rich centromeres in an oomycete reveal divergence of centromere features in Stramenopila-Alveolata-Rhizaria lineages Y Fang, MA Coelho, H Shu, K Schotanus, BC Thimmappa, V Yadav, ... PLoS genetics 16 (3), e1008646, 2020 | 27 | 2020 |
Nonlinear sequence similarity between the Xist and Rsx long noncoding RNAs suggests shared functions of tandem repeat domains D Sprague, SA Waters, JM Kirk, JR Wang, PB Samollow, PD Waters, ... RNA 25 (8), 1004-1019, 2019 | 27 | 2019 |
Transcriptome atlases of mouse brain reveals differential expression across brain regions and genetic backgrounds W Sun, S Lee, V Zhabotynsky, F Zou, FA Wright, JJ Crowley, Z Yun, ... G3: Genes| Genomes| Genetics 2 (2), 203-211, 2012 | 25 | 2012 |
Correcting nucleotide-specific biases in high-throughput sequencing data JR Wang, B Quach, TS Furey BMC bioinformatics 18, 1-10, 2017 | 23 | 2017 |
Genome-wide compatible SNP intervals and their properties J Wang, KJ Moore, Q Zhang, FPM de Villena, W Wang, L McMillan Proceedings of the First ACM International Conference on Bioinformatics and …, 2010 | 19 | 2010 |