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Guangchuang Yu
Guangchuang Yu
Professor, Department of Bioinformatics, Southern Medical University
Verified email at smu.edu.cn - Homepage
Title
Cited by
Cited by
Year
clusterProfiler: an R package for comparing biological themes among gene clusters
G Yu, LG Wang, Y Han, QY He
Omics: a journal of integrative biology 16 (5), 284-287, 2012
224762012
clusterProfiler 4.0: A universal enrichment tool for interpreting omics data
T Wu, E Hu, S Xu, M Chen, P Guo, Z Dai, T Feng, L Zhou, W Tang, L Zhan, ...
The Innovation 2 (3), 100141, 2021
55842021
ggtree: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data
G Yu, DK Smith, H Zhu, Y Guan, TTY Lam
Methods in Ecology and Evolution 8 (1), 28-36, 2017
33402017
ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparison and visualization
G Yu, LG Wang, QY He
Bioinformatics 31 (14), 2382-2383, 2015
28012015
ReactomePA: an R/Bioconductor package for reactome pathway analysis and visualization
G Yu, QY He
Molecular BioSystems 12 (2), 477-479, 2016
13762016
GOSemSim: an R package for measuring semantic similarity among GO terms and gene products
G Yu, F Li, Y Qin, X Bo, Y Wu, S Wang
Bioinformatics 26 (7), 976-978, 2010
11032010
Using ggtree to Visualize Data on Tree‐Like Structures
G Yu
Current Protocols in Bioinformatics 69 (1), e96, 2020
9822020
DOSE: an R/Bioconductor package for Disease Ontology Semantic and Enrichment analysis
G Yu, LG Wang, GR Yan, QY He
Bioinformatics 31 (4), 608-9, 2015
8902015
Two Methods for Mapping and Visualizing Associated Data on Phylogeny Using Ggtree
G Yu, TTY Lam, H Zhu, Y Guan
Molecular Biology and Evolution 35 (12), 3041-3043, 2018
5352018
IOBR: Multi-omics Immuno-Oncology Biological Research to decode tumor microenvironment and signatures
W Liao, D Zeng, Z Ye, R Shen, G Yu, J Wu, Y Xiong, R Zhou, W Qiu, ...
Frontiers in Immunology 12, 687975, 2021
4522021
Treeio: An R Package for Phylogenetic Tree Input and Output with Richly Annotated and Associated Data
LG Wang, TTY Lam, S Xu, Z Dai, L Zhou, T Feng, P Guo, CW Dunn, ...
Molecular Biology and Evolution 37 (2), 599-603, 2020
3902020
RIdeogram: Drawing SVG graphics to visualize and map genome-wide data on the idiograms
Z Hao, D Lv, Y Ge, J Shi, D Weijers, G Yu, J Chen
PeerJ Computer Science 6, e251, 2020
2922020
ggVennDiagram: An intuitive, easy-to-use, and highly customizable R package to generate Venn diagram
CH Gao, G Yu, P Cai
Frontiers in Genetics 12, 706907, 2021
233*2021
Enrichplot: visualization of functional enrichment result
G Yu
R package version 1 (2), 2019
2172019
Gene ontology semantic similarity analysis using GOSemSim
G Yu
Stem Cell Transcriptional Networks: Methods and Protocols, 207-215, 2020
1742020
Gut microbiota and metabolite alterations associated with reduced bone mineral density or bone metabolic indexes in postmenopausal osteoporosis
J He, S Xu, B Zhang, C Xiao, Z Chen, F Si, J Fu, X Lin, G Zheng, G Yu, ...
Aging (Albany NY) 12 (9), 8583-8604, 2020
1672020
ggtreeExtra: Compact visualization of richly annotated phylogenetic data
S Xu, Z Dai, P Guo, X Fu, S Liu, L Zhou, W Tang, T Feng, M Chen, L Zhan, ...
Molecular Biology and Evolution 38 (9), 4039-4042, 2021
1532021
Use ggbreak to effectively utilize plotting space to deal with large datasets and outliers
S Xu, M Chen, T Feng, L Zhan, L Zhou, G Yu
Frontiers in Genetics 12, 774846, 2021
1512021
Cellular microRNA let‐7c inhibits M1 protein expression of the H1N1 influenza A virus in infected human lung epithelial cells
YJ Ma, J Yang, XL Fan, HB Zhao, W Hu, ZP Li, GC Yu, XR Ding, JZ Wang, ...
Journal of cellular and molecular medicine 16 (10), 2539-2546, 2012
1342012
Genistein‐induced mitotic arrest of gastric cancer cells by downregulating KIF20A, a proteomics study
GR Yan, FY Zou, BL Dang, Y Zhang, G Yu, X Liu, QY He
Proteomics 12 (14), 2391-2399, 2012
1052012
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Articles 1–20