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Upasana L. Mallimadugula
Upasana L. Mallimadugula
Verified email at wustl.edu - Homepage
Title
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Year
SARS-CoV-2 simulations go exascale to predict dramatic spike opening and cryptic pockets across the proteome
MI Zimmerman, JR Porter, MD Ward, S Singh, N Vithani, A Meller, ...
Nature chemistry 13 (7), 651-659, 2021
266*2021
A cryptic pocket in Ebola VP35 allosterically controls RNA binding
MA Cruz, TE Frederick, UL Mallimadugula, S Singh, N Vithani, ...
Nature communications 13 (1), 1-10, 2022
36*2022
Opening of a cryptic pocket in β-lactamase increases penicillinase activity
CR Knoverek, UL Mallimadugula, S Singh, E Rennella, TE Frederick, ...
Proceedings of the National Academy of Sciences 118 (47), e2106473118, 2021
212021
Apolipoprotein E4 has extensive conformational heterogeneity in lipid-free and lipid-bound forms
MD Stuchell-Brereton, MI Zimmerman, JJ Miller, UL Mallimadugula, ...
Proceedings of the National Academy of Sciences 120 (7), e2215371120, 2023
182023
The probability of cryptic pocket opening controls functional tradeoffs in filovirus immune evasion.
UL Mallimadugula, MA Cruz, N Vithani, MI Zimmerman, GR Bowman
bioRxiv, 2024.08. 22.609218, 2024
2024
Accounting for fast vs slow exchange in single molecule FRET experiments reveals hidden conformational states
JJ Miller, UL Mallimadugula, MI Zimmerman, MD Stuchell-Brereton, ...
bioRxiv, 2024.06. 03.597137, 2024
2024
Parallel path mechanisms lead to nonmonotonic force-velocity curves and an optimum load for molecular motor function
UL Mallimadugula, EA Galburt
Physical Review E 105 (3), 034405, 2022
2022
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Articles 1–7