|Interval between infections and viral hierarchy are determinants of viral interference following influenza virus infection in a ferret model|
KL Laurie, TA Guarnaccia, LA Carolan, AWC Yan, M Aban, S Petrie, ...
The Journal of infectious diseases 212 (11), 1701-1710, 2015
|The altered entry pathway and antigenic distance of the SARS-CoV-2 Omicron variant map to separate domains of spike protein|
TP Peacock, JC Brown, J Zhou, N Thakur, K Sukhova, J Newman, ...
biorxiv 15, e0241955, 2022
|Innate immunity and the inter-exposure interval determine the dynamics of secondary influenza virus infection and explain observed viral hierarchies|
P Cao, AWC Yan, JM Heffernan, S Petrie, RG Moss, LA Carolan, ...
PLoS computational biology 11 (8), e1004334, 2015
|Deterministic electron ptychography at atomic resolution|
AJ D'alfonso, AJ Morgan, AWC Yan, P Wang, H Sawada, AI Kirkland, ...
Physical Review B 89 (6), 064101, 2014
|Modelling upper respiratory viral load dynamics of SARS-CoV-2|
JD Challenger, CY Foo, Y Wu, AWC Yan, MM Marjaneh, F Liew, ...
BMC medicine 20 (1), 1-20, 2022
|Estimating internationally imported cases during the early COVID-19 pandemic|
TF Menkir, T Chin, JA Hay, ED Surface, PM De Salazar, CO Buckee, ...
Nature communications 12 (1), 1-10, 2021
|Influencing public health policy with data-informed mathematical models of infectious diseases: Recent developments and new challenges|
A Alahmadi, S Belet, A Black, D Cromer, JA Flegg, T House, ...
Epidemics 32, 100393, 2020
|On the role of CD8+ T cells in determining recovery time from influenza virus infection|
P Cao, Z Wang, AWC Yan, J McVernon, J Xu, JM Heffernan, K Kedzierska, ...
Frontiers in immunology 7, 611, 2016
|Modelling cross-reactivity and memory in the cellular adaptive immune response to influenza infection in the host|
AWC Yan, P Cao, JM Heffernan, J McVernon, KM Quinn, NL La Gruta, ...
Journal of theoretical biology 413, 34-49, 2017
|Favipiravir-resistant influenza A virus shows potential for transmission|
DH Goldhill, A Yan, R Frise, J Zhou, J Shelley, A Gallego CortÚs, S Miah, ...
PLOS Pathogens 17 (6), e1008937, 2021
|On the extinction probability in models of within-host infection: the role of latency and immunity|
AWC Yan, P Cao, JM McCaw
Journal of mathematical biology 73 (4), 787-813, 2016
|Estimating ventilation rates in rooms with varying occupancy levels: Relevance for reducing transmission risk of airborne pathogens|
AK Deol, D Scarponi, P Beckwith, TA Yates, AS Karat, AWC Yan, ...
Plos one 16 (6), e0253096, 2021
|The distribution of the time taken for an epidemic to spread between two communities|
AWC Yan, AJ Black, JM McCaw, N Rebuli, JV Ross, AJ Swan, RI Hickson
Mathematical Biosciences 303, 139-147, 2018
|Quantifying mechanistic traits of influenza viral dynamics using in vitro data|
AWC Yan, J Zhou, CAA Beauchemin, CA Russell, WS Barclay, S Riley
Epidemics 33, 100406, 2020
|Sequential infection experiments for quantifying innate and adaptive immunity during influenza infection|
AWC Yan, SG Zaloumis, JA Simpson, JM McCaw
PLoS computational biology 15 (1), e1006568, 2019
|Fast deterministic ptychographic imaging using x-rays|
AWC Yan, AJ D’Alfonso, AJ Morgan, CT Putkunz, LJ Allen
Microscopy and Microanalysis 20 (4), 1090-1099, 2014
|KIR-HLA interactions extend human CD8+ T cell lifespan in vivo|
Y Zhang, AWC Yan, L Boelen, L Hadcocks, A Salam, DP Gispert, ...
The Journal of Clinical Investigation 133 (12), 2023
|Influenza viral dynamics models to explore the roles of innate and adaptive immunity|
|Modelling the viral dynamics of the SARS-CoV-2 Delta and Omicron variants in different cell types (preprint)|
CP McCormack, AWC Yan, JC Brown, K Sukhova, TP Peacock, ...
|Saturation of influenza virus neutralization and antibody consumption can both lead to bistable growth kinetics|
S Xu, AWC Yan, H Peck, L Gillespie, IG Barr, X Yang, SJ Turner, ...