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Xinyi E. Chen
Xinyi E. Chen
Verified email at pennmedicine.upenn.edu - Homepage
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Cited by
Cited by
Year
Deep whole-genome ctDNA chronology of treatment-resistant prostate cancer
C Herberts, M Annala, J Sipola, SWS Ng, XE Chen, A Nurminen, ...
Nature 608 (7921), 199-208, 2022
922022
Prospective evaluation of clinical outcomes using a multiplex liquid biopsy targeting diverse resistance mechanisms in metastatic prostate cancer
JM Sperger, H Emamekhoo, RR McKay, CN Stahlfeld, A Singh, XE Chen, ...
Journal of Clinical Oncology 39 (26), 2926, 2021
432021
Multiregion sampling of de novo metastatic prostate cancer reveals complex polyclonality and augments clinical genotyping
EW Warner, K Van der Eecken, AJ Murtha, EM Kwan, C Herberts, J Sipola, ...
Nature Cancer, 1-17, 2024
62024
Biochemical activity is the default DNA state in eukaryotes
I Luthra, XE Chen, C Jensen, AM Rafi, AL Salaudeen, CG de Boer
bioRxiv, 2022.12. 16.520785, 2022
42022
Regulatory activity is the default DNA state in eukaryotes
I Luthra, C Jensen, XE Chen, AL Salaudeen, AM Rafi, CG de Boer
Nature Structural & Molecular Biology, 1-9, 2024
22024
Modeling the trajectory of SARS-CoV-2 spike protein evolution in continuous latent space using a neural network and Gaussian process
S King, XE Chen, SWS Ng, K Rostin, T Roberts, SV Hahn, JC Schwab, ...
bioRxiv, 2021.12. 04.471198, 2021
22021
GIL: a python package for designing custom indexing primers
N Mateyko, O Tariq, XE Chen, W Cheney, AL Salaudeen, I Luthra, ...
Bioinformatics 39 (6), btad328, 2023
2023
Young innovators and the bioeconomy
XE Chen, S King, SWS Ng, P Salman, JC Schwab, P Sekhon
Genomics and the Global Bioeconomy, 83-100, 2023
2023
Forecasting SARS-CoV-2 spike protein evolution from small data by deep learning and regression
S King, XE Chen, SWS Ng, K Rostin, SV Hahn, T Roberts, JC Schwab, ...
Frontiers in Systems Biology 4, 1284668, 0
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