| The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells C Trapnell, D Cacchiarelli, J Grimsby, P Pokharel, S Li, M Morse, ... Nature biotechnology 32 (4), 381-386, 2014 | 4552 | 2014 |
| A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA M Cesana, D Cacchiarelli, I Legnini, T Santini, O Sthandier, M Chinappi, ... Cell 147 (2), 358-369, 2011 | 2744 | 2011 |
| Perturbation of m6A writers reveals two distinct classes of mRNA methylation at internal and 5′ sites S Schwartz, MR Mumbach, M Jovanovic, T Wang, K Maciag, GG Bushkin, ... Cell reports 8 (1), 284-296, 2014 | 1079 | 2014 |
| LIN28 regulates stem cell metabolism and conversion to primed pluripotency J Zhang, S Ratanasirintrawoot, S Chandrasekaran, Z Wu, SB Ficarro, ... Cell stem cell 19 (1), 66-80, 2016 | 335 | 2016 |
| Extracellular matrix hydrogel derived from decellularized tissues enables endodermal organoid culture GG Giobbe, C Crowley, C Luni, S Campinoti, M Khedr, K Kretzschmar, ... Nature communications 10 (1), 5658, 2019 | 288 | 2019 |
| miRNAs as serum biomarkers for Duchenne muscular dystrophy D Cacchiarelli, I Legnini, J Martone, V Cazzella, A d'Amico, E Bertini, ... EMBO molecular medicine 3 (5), 258-265, 2011 | 266 | 2011 |
| MicroRNAs involved in molecular circuitries relevant for the Duchenne muscular dystrophy pathogenesis are controlled by the dystrophin/nNOS pathway D Cacchiarelli, J Martone, E Girardi, M Cesana, T Incitti, M Morlando, ... Cell metabolism 12 (4), 341-351, 2010 | 265 | 2010 |
| Integrative analyses of human reprogramming reveal dynamic nature of induced pluripotency D Cacchiarelli, C Trapnell, MJ Ziller, M Soumillon, M Cesana, R Karnik, ... Cell 162 (2), 412-424, 2015 | 228 | 2015 |
| Characterization of directed differentiation by high-throughput single-cell RNA-Seq M Soumillon, D Cacchiarelli, S Semrau, A van Oudenaarden, ... BioRxiv, 003236, 2014 | 222 | 2014 |
| Dissecting neural differentiation regulatory networks through epigenetic footprinting MJ Ziller, R Edri, Y Yaffe, J Donaghey, R Pop, W Mallard, R Issner, ... Nature 518 (7539), 355-359, 2015 | 205 | 2015 |
| Combining NGN2 programming with developmental patterning generates human excitatory neurons with NMDAR-mediated synaptic transmission R Nehme, E Zuccaro, SD Ghosh, C Li, JL Sherwood, O Pietilainen, ... Cell reports 23 (8), 2509-2523, 2018 | 174 | 2018 |
| miR‐31 modulates dystrophin expression: new implications for Duchenne muscular dystrophy therapy D Cacchiarelli, T Incitti, J Martone, M Cesana, V Cazzella, T Santini, ... EMBO reports 12 (2), 136-141, 2011 | 165 | 2011 |
| Coupled RNA processing and transcription of intergenic primary microRNAs M Ballarino, F Pagano, E Girardi, M Morlando, D Cacchiarelli, ... Molecular and cellular biology 29 (20), 5632-5638, 2009 | 154 | 2009 |
| Epigenetic restriction of extraembryonic lineages mirrors the somatic transition to cancer ZD Smith, J Shi, H Gu, J Donaghey, K Clement, D Cacchiarelli, A Gnirke, ... Nature 549 (7673), 543-547, 2017 | 150 | 2017 |
| Genetic determinants and epigenetic effects of pioneer-factor occupancy J Donaghey, S Thakurela, J Charlton, JS Chen, ZD Smith, H Gu, R Pop, ... Nature genetics 50 (2), 250-258, 2018 | 148 | 2018 |
| Phenotypic characterization of a comprehensive set of MAPK1/ERK2 missense mutants L Brenan, A Andreev, O Cohen, S Pantel, A Kamburov, D Cacchiarelli, ... Cell reports 17 (4), 1171-1183, 2016 | 141 | 2016 |
| Genome-wide tracking of dCas9-methyltransferase footprints C Galonska, J Charlton, AL Mattei, J Donaghey, K Clement, H Gu, ... Nature communications 9 (1), 597, 2018 | 133 | 2018 |
| Pseudo-temporal ordering of individual cells reveals dynamics and regulators of cell fate decisions C Trapnell, D Cacchiarelli, J Grimsby, P Pokharel, S Li, M Morse, ... Nature biotechnology 32 (4), 381, 2014 | 117 | 2014 |
| Triple vectors expand AAV transfer capacity in the retina A Maddalena, P Tornabene, P Tiberi, R Minopoli, A Manfredi, M Mutarelli, ... Molecular Therapy 26 (2), 524-541, 2018 | 104 | 2018 |
| Cross-regulation between TDP-43 and paraspeckles promotes pluripotency-differentiation transition M Modic, M Grosch, G Rot, S Schirge, T Lepko, T Yamazaki, FCY Lee, ... Molecular cell 74 (5), 951-965. e13, 2019 | 92 | 2019 |
irene bozzoniSapienza Università di RomaVerified email at uniroma1.it
