GeneTonic: an R/Bioconductor package for streamlining the interpretation of RNA-seq data F Marini, A Ludt, J Linke, K Strauch BMC bioinformatics 22 (1), 610, 2021 | 27 | 2021 |
Transforming growth factor-β activated kinase 1 (Tak1) is activated in hepatocellular carcinoma, mediates tumor progression, and predicts unfavorable outcome DA Ridder, LL Urbansky, HR Witzel, M Schindeldecker, A Weinmann, ... Cancers 14 (2), 430, 2022 | 12 | 2022 |
Interactive and Reproducible Workflows for Exploring and Modeling RNA‐seq Data with pcaExplorer, Ideal, and GeneTonic A Ludt, A Ustjanzew, H Binder, K Strauch, F Marini Current protocols 2 (4), e411, 2022 | 10 | 2022 |
Real-Time Augmented Reality Annotation for Surgical Education during Laparoscopic Surgery: Results from a Single-Center Randomized Controlled Trial and Future Aspects F Huettl, F Heinrich, C Boedecker, L Vradelis, A Ludt, W Kneist, H Lang, ... Journal of the American College of Surgeons 237 (2), 292-300, 2023 | 3 | 2023 |
Magnetique: an interactive web application to explore transcriptome signatures of heart failure T Britto-Borges, A Ludt, E Boileau, E Gjerga, F Marini, C Dieterich Journal of Translational Medicine 20 (1), 513, 2022 | 2 | 2022 |
Modulation of cellular transcriptome and proteome composition by azidohomoalanine—implications on click chemistry–based secretome analysis F Kirschner, D Arnold-Schild, C Leps, MK Łącki, M Klein, Y Chen, A Ludt, ... Journal of Molecular Medicine 101 (7), 855-867, 2023 | 1 | 2023 |
Approach to risk stratification for papillary thyroid carcinoma based on molecular profiling: institutional analysis JI Staubitz, C Müller, A Heymans, C Merten, B Roos, A Poplawski, A Ludt, ... BJS open 7 (3), zrad029, 2023 | 1 | 2023 |
OPEN ACCESS EDITED BY M Perreau, P Zhang, M Izraelson, M Delacher, F Marini, AS Nedwed, ... Understanding Convergent Evasion Mechanisms in Cancer and Chronic Infection …, 2024 | | 2024 |
Using single-cell chromatin accessibility sequencing to characterize CD4+ T cells from murine tissues KL Braband, AS Nedwed, SS Helbich, M Simon, N Beumer, B Brors, ... Frontiers in Immunology 14, 1232511, 2023 | | 2023 |
Using combined single-cell gene expression, TCR sequencing and cell surface protein barcoding to characterize and track CD4+ T cell clones from murine tissues AS Nedwed, SS Helbich, KL Braband, M Volkmar, M Delacher, F Marini Frontiers in Immunology 14, 1241283, 2023 | | 2023 |
GeneTonic: enjoying the interpretation of your RNA-seq data analysis F Marini, A Ludt dim 41388, 5, 0 | | |