| Bioinformatics resources and tools for conformational B-cell epitope prediction P Sun, H Ju, Z Liu, Q Ning, J Zhang, X Zhao, Y Huang, Z Ma, Y Li Computational and mathematical methods in medicine 2013, 2013 | 138 | 2013 |
| PSNO: Predicting Cysteine S-Nitrosylation Sites by Incorporating Various Sequence-Derived Features into the General Form of Chou’s PseAAC J Zhang, X Zhao, P Sun, Z Ma International Journal of Molecular Sciences 15 (7), 11204-11219, 2014 | 116 | 2014 |
| Prediction of Protein Phosphorylation Sites by Using the Composition of k-Spaced Amino Acid Pairs X Zhao, W Zhang, X Xu, Z Ma, M Yin Public Library of Science 7 (10), e46302, 2012 | 69 | 2012 |
| dForml (KNN)-PseAAC: Detecting formylation sites from protein sequences using K-nearest neighbor algorithm via Chou's 5-step rule and pseudo components Q Ning, Z Ma, X Zhao Journal of theoretical biology 470, 43-49, 2019 | 67 | 2019 |
| Predicting protein-protein interactions by combing various sequence-derived features into the general form of Chou’s Pseudo amino acid composition XW Zhao, ZQ Ma, MH Yin Protein and peptide letters 19 (5), 492-500, 2012 | 59 | 2012 |
| Accurate in silico identification of protein succinylation sites using an iterative semi-supervised learning technique X Zhao, Q Ning, H Chai, Z Ma Journal of theoretical biology 374, 60-65, 2015 | 52 | 2015 |
| Prediction of lysine ubiquitylation with ensemble classifier and feature selection X Zhao, X Li, Z Ma, M Yin International Journal of Molecular Sciences 12 (12), 8347-8361, 2011 | 49 | 2011 |
| Using support vector machine and evolutionary profiles to predict antifreeze protein sequences X Zhao, Z Ma, M Yin International journal of molecular sciences 13 (2), 2196-2207, 2012 | 46 | 2012 |
| PECM: Prediction of extracellular matrix proteins using the concept of Chou’s pseudo amino acid composition J Zhang, P Sun, X Zhao, Z Ma Journal of Theoretical Biology 363, 412-418, 2014 | 44 | 2014 |
| Detecting succinylation sites from protein sequences using ensemble support vector machine Q Ning, X Zhao, L Bao, Z Ma, X Zhao BMC bioinformatics 19 (1), 1-9, 2018 | 43 | 2018 |
| Large-scale prediction of protein ubiquitination sites using a multimodal deep architecture F He, R Wang, J Li, L Bao, D Xu, X Zhao BMC systems biology 12, 81-90, 2018 | 38 | 2018 |
| Aeroelastic control of long-span suspension bridges JMR Graham, DJN Limebeer, X Zhao | 37 | 2011 |
| Controllability and observability of a well-posed system coupled with a finite-dimensional system X Zhao, G Weiss IEEE Transactions on Automatic Control 56 (1), 88-99, 2010 | 36 | 2010 |
| Heterogeneous graph attention network based on meta-paths for lncrna–disease association prediction X Zhao, X Zhao, M Yin Briefings in bioinformatics 23 (1), bbab407, 2022 | 35 | 2022 |
| Conformational B-cell epitopes prediction from sequences using cost-sensitive ensemble classifiers and spatial clustering J Zhang, X Zhao, P Sun, B Gao, Z Ma BioMed research international 2014, 2014 | 35 | 2014 |
| Identify DNA-binding proteins with optimal Chou's amino acid composition XW Zhao, XT Li, ZQ Ma, MH Yin Protein and Peptide Letters 19 (4), 398-405, 2012 | 31 | 2012 |
| EPuL: an enhanced positive-unlabeled learning algorithm for the prediction of pupylation sites X Nan, L Bao, X Zhao, X Zhao, AK Sangaiah, GG Wang, Z Ma Molecules 22 (9), 1463, 2017 | 28 | 2017 |
| An improved binary differential evolution algorithm for feature selection in molecular signatures XS Zhao, LL Bao, Q Ning, JC Ji, XW Zhao Molecular informatics 37 (4), 1700081, 2018 | 26 | 2018 |
| PGluS: prediction of protein S-glutathionylation sites with multiple features and analysis X Zhao, Q Ning, M Ai, H Chai, M Yin Molecular BioSystems 11 (3), 923-929, 2015 | 26 | 2015 |
| Position-specific analysis and prediction of protein pupylation sites based on multiple features X Zhao, J Dai, Q Ning, Z Ma, M Yin, P Sun BioMed research international 2013, 2013 | 26 | 2013 |
