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sean benler
sean benler
NCBI
Verified email at nih.gov
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Development and use of personalized bacteriophage-based therapeutic cocktails to treat a patient with a disseminated resistant Acinetobacter baumannii infection
RT Schooley, B Biswas, JJ Gill, A Hernandez-Morales, J Lancaster, ...
Antimicrobial agents and chemotherapy 61 (10), 10.1128/aac. 00954-17, 2017
11762017
Thousands of previously unknown phages discovered in whole-community human gut metagenomes
S Benler, N Yutin, D Antipov, M Rayko, S Shmakov, AB Gussow, ...
Microbiome 9, 1-17, 2021
1572021
Analysis of metagenome-assembled viral genomes from the human gut reveals diverse putative CrAss-like phages with unique genomic features
N Yutin, S Benler, SA Shmakov, YI Wolf, I Tolstoy, M Rayko, D Antipov, ...
Nature communications 12 (1), 1044, 2021
1162021
Seeker: alignment-free identification of bacteriophage genomes by deep learning
N Auslander, AB Gussow, S Benler, YI Wolf, EV Koonin
Nucleic acids research 48 (21), e121-e121, 2020
1042020
Metabolomics of reef benthic interactions reveals a bioactive lipid involved in coral defence
RA Quinn, MJA Vermeij, AC Hartmann, I Galtier d'Auriac, S Benler, ...
Proceedings of the Royal Society B: Biological Sciences 283 (1829), 20160469, 2016
772016
A diversity-generating retroelement encoded by a globally ubiquitous Bacteroides phage
S Benler, AG Cobián-Güemes, K McNair, SH Hung, K Levi, R Edwards, ...
Microbiome 6, 1-10, 2018
632018
Cargo Genes of Tn7-Like Transposons Comprise an Enormous Diversity of Defense Systems, Mobile Genetic Elements, and Antibiotic Resistance Genes
S Benler, G Faure, H Altae-Tran, S Shmakov, F Zhang, E Koonin
MBio 12 (6), e02938-21, 2021
462021
Genomic and ecological attributes of marine bacteriophages encoding bacterial virulence genes
CB Silveira, FH Coutinho, GS Cavalcanti, S Benler, MP Doane, ...
BMC genomics 21, 1-11, 2020
432020
Alternating lysis and lysogeny is a winning strategy in bacteriophages due to Parrondo's paradox
KH Cheong, T Wen, S Benler, JM Koh, EV Koonin
Proceedings of the National Academy of Sciences 119 (13), e2115145119, 2022
342022
Phage lysis‐lysogeny switches and programmed cell death: Danse macabre
S Benler, EV Koonin
BioEssays 42 (12), 2000114, 2020
302020
Cystic fibrosis rapid response: translating multi-omics data into clinically relevant information
AG Cobián Güemes, YW Lim, RA Quinn, DJ Conrad, S Benler, ...
MBio 10 (2), 10.1128/mbio. 00431-19, 2019
272019
The missing tailed phages: prediction of small capsid candidates
A Luque, S Benler, DY Lee, C Brown, S White
Microorganisms 8 (12), 1944, 2020
212020
Recruitment of mobile genetic elements for diverse cellular functions in prokaryotes
S Benler, EV Koonin
Frontiers in Molecular Biosciences 9, 821197, 2022
172022
Fishing for phages in metagenomes: what do we catch, what do we miss?
S Benler, EV Koonin
Current opinion in virology 49, 142-150, 2021
132021
Three-Dimensional Molecular Cartography of the Caribbean Reef-Building Coral Orbicella faveolata
M Little, EE George, MGI Arts, J Shivak, S Benler, J Huckeba, ZA Quinlan, ...
Frontiers in Marine Science 8, 627724, 2021
112021
Modularity and diversity of target selectors in Tn7 transposons
G Faure, M Saito, S Benler, I Peng, YI Wolf, J Strecker, H Altae-Tran, ...
Molecular cell 83 (12), 2122-2136. e10, 2023
102023
A distinct contractile injection system gene cluster found in a majority of healthy adult human microbiomes
MI Rojas, GS Cavalcanti, K McNair, S Benler, AT Alker, ...
Msystems 5 (4), 10.1128/msystems. 00648-20, 2020
102020
Gp4 is a nuclease required for morphogenesis of T4-like bacteriophages
S Benler, SH Hung, JA Vander Griend, GA Peters, F Rohwer, AM Segall
Virology 543, 7-12, 2020
22020
Three-Dimensional Molecular Cartography of the Caribbean Reef-Building Coral Orbicella faveolata
AS Mount, JHR Burns, S Fraune, M Little, TNF Roach, M Little, EE George, ...
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KH Cheong, T Wen, S Benler, JM Koh, EV Koonin
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Articles 1–20