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Nuo Liu
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Microenvironment drives cell state, plasticity, and drug response in pancreatic cancer
S Raghavan, PS Winter, AW Navia, HL Williams, A DenAdel, KE Lowder, ...
Cell 184 (25), 6119-6137. e26, 2021
2502021
Multiple optimal reconciliations under the duplication-loss-coalescence model
H Du, YS Ong, M Knittel, R Mawhorter, N Liu, G Gross, R Tojo, ...
IEEE/ACM transactions on computational biology and bioinformatics 18 (6 …, 2019
82019
Inferring pareto-optimal reconciliations across multiple event costs under the duplication-loss-coalescence model
R Mawhorter, N Liu, R Libeskind-Hadas, YC Wu
BMC bioinformatics 20, 1-13, 2019
52019
Compressed phenotypic screens for complex multicellular models and high-content assays
BE Mead, C Kummerlowe, N Liu, WE Kattan, T Cheng, JH Cheah, ...
bioRxiv, 2023
22023
Maximum parsimony reconciliation in the DTLOR model
J Liu, R Mawhorter, N Liu, S Santichaivekin, E Bush, R Libeskind-Hadas
BMC bioinformatics 22, 1-22, 2021
22021
An integer linear programming solution for the most parsimonious reconciliation problem under the duplication-loss-coalescence model
M Carothers, J Gardi, G Gross, T Kuze, N Liu, F Plunkett, J Qian, YC Wu
Proceedings of the 11th ACM International Conference on Bioinformatics …, 2020
22020
xenoGI 3: using the DTLOR model to reconstruct the evolution of gene families in clades of microbes
N Liu, TA Gonzalez, J Fischer, C Hong, M Johnson, R Mawhorter, ...
BMC bioinformatics 24 (1), 295, 2023
2023
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