| A modular framework for multiscale, multicellular, spatiotemporal modeling of acute primary viral infection and immune response in epithelial tissues and its application to … TJ Sego, JO Aponte-Serrano, J Ferrari-Gianlupi, S Heaps, EM Quardokus, ... PLoS computational biology 16 (12), e1008451, 2020 | 59* | 2020 |
| Iterative community-driven development of a SARS-CoV-2 tissue simulator M Getz, Y Wang, G An, M Asthana, A Becker, C Cockrell, N Collier, ... BioRxiv, 2020.04. 02.019075, 2020 | 53 | 2020 |
| Generation of multicellular spatiotemporal models of population dynamics from ordinary differential equations, with applications in viral infection TJ Sego, JO Aponte-Serrano, JF Gianlupi, JA Glazier BMC biology 19, 1-24, 2021 | 14* | 2021 |
| Multiscale model of antiviral timing, potency, and heterogeneity effects on an epithelial tissue patch infected by SARS-CoV-2 J Ferrari Gianlupi, T Mapder, TJ Sego, JP Sluka, SK Quinney, M Craig, ... Viruses 14 (3), 605, 2022 | 13 | 2022 |
| Advancing therapies for viral infections using mechanistic computational models of the dynamic interplay between the virus and host immune response VI Zarnitsyna, JF Gianlupi, A Hagar, TJ Sego, JA Glazier Current opinion in virology 50, 103-109, 2021 | 11 | 2021 |
| PhenoCellPy: A Python package for biological cell behavior modeling JF Gianlupi, TJ Sego, JP Sluka, JA Glazier bioRxiv, 2023.04. 12.535625, 2023 | | 2023 |
| Breaking Barriers in Multiscale Agent-Based Models: Effects of Cell Individuality on Viral Infection Treatment and a Path for Cross-Platform Validation JF Gianlupi Indiana University, 2023 | | 2023 |
| Accelerated solving of coupled, non-linear ODEs through LSTM-AI CF de Lima, JF Gianlupi, J Metzcar, J Zerick arXiv preprint arXiv:2009.08278, 2020 | | 2020 |
| A Modular Framework for Multiscale Spatial Modeling of Viral Infection and Immune Response in Epithelial Tissue (preprint) TJ Sego, JO Aponte-Serrano, JF Gianlupi, S Heaps, K Breithaupt, ... | | 2020 |
| Influência do surfactante na evolução de espumas molhadas e definição dos graus de liberdade do Modelo de Potts Celular JF Gianlupi | | 2018 |
| Influência de características físicas ou computacionais na simulação de topologia e evolução temporal de espumas molhadas JF Gianlupi | | 2015 |
| Effects of Spatial Heterogeneity on the Outcomes and Interpretation of in-Host Viral Infection Models of Influenza and Antiviral Treatment of COVID Infection JA Glazier, TJ Sego, JF Gianlupi, JO Aponte-Serrano, T Mapder, JP Sluka, ... 2022 Spring Central Sectional Meeting, 0 | | |
