| The khmer software package: enabling efficient nucleotide sequence analysis MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... F1000Research 4, 2015 | 352* | 2015 |
| Common Workflow Language v1.0 P Amstutz, MR Crusoe, N Tijanić, B Chapman, J Chilton, M Heuer, ... FigShare, 2016 | 236* | 2016 |
| MGnify: the microbiome analysis resource in 2020 AL Mitchell, A Almeida, M Beracochea, M Boland, J Burgin, G Cochrane, ... Nucleic acids research 48 (D1), D570-D578, 2020 | 221 | 2020 |
| FAIR computational workflows C Goble, S Cohen-Boulakia, S Soiland-Reyes, D Garijo, Y Gil, MR Crusoe, ... Data Intelligence 2 (1-2), 108-121, 2020 | 59 | 2020 |
| Sharing interoperable workflow provenance: A review of best practices and their practical application in CWLProv FZ Khan, S Soiland-Reyes, RO Sinnott, A Lonie, C Goble, MR Crusoe GigaScience 8 (11), giz095, 2019 | 46* | 2019 |
| Comparative genomics reveals accelerated evolution in conserved pathways during the diversification of anole lizards M Tollis, ED Hutchins, J Stapley, SM Rupp, WL Eckalbar, I Maayan, ... Genome Biology and Evolution 10 (2), 489-506, 2018 | 34 | 2018 |
| Recommendations for the packaging and containerizing of bioinformatics software B Gruening, O Sallou, P Moreno, F da Veiga Leprevost, H Ménager, ... F1000Research 7, 2018 | 31 | 2018 |
| Enabling precision medicine via standard communication of HTS provenance, analysis, and results G Alterovitz, D Dean, C Goble, MR Crusoe, S Soiland-Reyes, A Bell, ... PLoS biology 16 (12), e3000099, 2018 | 28 | 2018 |
| Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics S Baichoo, Y Souilmi, S Panji, G Botha, A Meintjes, S Hazelhurst, ... BMC bioinformatics 19 (1), 1-13, 2018 | 28 | 2018 |
| Scalable workflows and reproducible data analysis for genomics F Strozzi, R Janssen, R Wurmus, MR Crusoe, G Githinji, PD Tommaso, ... Evolutionary Genomics, 723-745, 2019 | 23 | 2019 |
| Robust Cross-Platform Workflows: How Technical and Scientific Communities Collaborate to Develop, Test and Share Best Practices for Data Analysis S Möller, SW Prescott, L Wirzenius, P Reinholdtsen, B Chapman, P Prins, ... Data Science and Engineering, 1-13, 2017 | 20 | 2017 |
| Methods included MR Crusoe, S Abeln, A Iosup, P Amstutz, J Chilton, N Tijanić, H Ménager, ... Communications of the ACM 65 (6), 54-63, 2022 | 19 | 2022 |
| Workflows Community Summit: Bringing the Scientific Workflows Community Together R Ferreira da Silva, H Casanova, K Chard, D Laney, D Ahn, S Jha, ... arXiv e-prints, arXiv: 2103.09181, 2021 | 12* | 2021 |
| Walking the talk: adopting and adapting sustainable scientific software development processes in a small biology lab MR Crusoe, CT Brown Journal of open research software 4 (1), 2016 | 11* | 2016 |
| SID-0002 Finger minutiae-based biometric profile for seafarers' identity documents: The standard for the biometric template required by the Convention No. 185 CL Musselman, VS Valencia, MR Crusoe International Labour Organization, 2006 | 11* | 2006 |
| Organizing and running bioinformatics hackathons within Africa: The H3ABioNet cloud computing experience AE Ahmed, PT Mpangase, S Panji, S Baichoo, Y Souilmi, FM Fadlelmola, ... AAS Open Research 1, 2018 | 10 | 2018 |
| Channeling Community Contributions to Scientific Software: A Sprint Experience CTB Michael R. Crusoe Journal of Open Research Software 4, 2016 | 9* | 2016 |
| Using bio. tools to generate and annotate workbench tool descriptions KH Hillion, I Kuzmin, A Khodak, E Rasche, M Crusoe, H Peterson, J Ison, ... F1000Research 6, 2017 | 8 | 2017 |
| Workflows Community Summit: Advancing the State-of-the-art of Scientific Workflows Management Systems Research and Development RF da Silva, H Casanova, K Chard, T Coleman, D Laney, D Ahn, S Jha, ... arXiv preprint arXiv:2106.05177, 2021 | 5 | 2021 |
| Search for computational workflow synergies in reproducible research data analyses in particle physics and life sciences T Šimko, K Cranmer, MR Crusoe, L Heinrich, A Khodak, D Kousidis, ... 2018 IEEE 14th International Conference on e-Science (e-Science), 403-404, 2018 | 4 | 2018 |
Stian Soiland-ReyesTechnical Architect, School of Computer Science, University of Manchester在 manchester.ac.uk 的電子郵件地址已通過驗證
