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Darien Yeung
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Separation orthogonality in liquid chromatography–mass spectrometry for proteomic applications: comparison of 16 different two-dimensional combinations
D Yeung, B Mizero, D Gussakovsky, N Klaassen, Y Lao, V Spicer, ...
Analytical chemistry 92 (5), 3904-3912, 2020
302020
Peptide retention time prediction in hydrophilic interaction liquid chromatography: Zwitter-ionic sulfoalkylbetaine and phosphorylcholine stationary phases
D Yeung, N Klaassen, B Mizero, V Spicer, OV Krokhin
Journal of Chromatography A 1619, 460909, 2020
212020
PythoMS: A Python framework to simplify and assist in the processing and interpretation of mass spectrometric data
LPE Yunker, S Donnecke, M Ting, D Yeung, JS McIndoe
Journal of chemical information and modeling 59 (4), 1295-1300, 2019
212019
Sequence-specific model for predicting peptide collision cross section values in proteomic ion mobility spectrometry
CH Chang, D Yeung, V Spicer, K Ogata, O Krokhin, Y Ishihama
Journal of Proteome Research 20 (7), 3600-3610, 2021
172021
Oxidation of titanocene (III): the deceptive simplicity of a color change
D Yeung, J Penafiel, HS Zijlstra, JS McIndoe
Inorganic Chemistry 57 (1), 457-461, 2018
172018
Peptide retention time prediction for peptides with post-translational modifications: N-terminal (α-amine) and lysine (ε-amine) acetylation
B Mizero, D Yeung, V Spicer, OV Krokhin
Journal of Chromatography A 1657, 462584, 2021
62021
Deep learning from harmonized peptide libraries enables retention time prediction of diverse post translational modifications
DB Wilburn, AE Shannon, V Spicer, AL Richards, D Yeung, DL Swaney, ...
BioRxiv, 2023.05. 30.542978, 2023
22023
Exploring the variable space of shallow machine learning models for reversed-phase retention time prediction
D Yeung, V Spicer, RP Zahedi, O Krokhin
Computational and Structural Biotechnology Journal 21, 2446-2453, 2023
22023
Accelerating Proteomics Using Broad Specificity Proteases
X Jiang, D Yeung, Y Liu, V Spicer, H Afshari, Y Lao, F Lin, O Krokhin, ...
Journal of Proteome Research 23 (4), 1360-1369, 2024
12024
Retention time prediction for post-translationally modified peptides: Ser, Thr, Tyr phosphorylation
T Battellino, D Yeung, H Neustaeter, V Spicer, K Ogata, Y Ishihama, ...
Journal of Chromatography A, 464714, 2024
12024
Compendium of Chromatographic Behavior of Post-translationally and Chemically Modified Peptides in Bottom-Up Proteomic Experiments
Q Neale, A Prefontaine, T Battellino, B Mizero, D Yeung, V Spicer, ...
Analytical Chemistry 95 (39), 14634-14642, 2023
12023
Chromatographic behaviour of peptides modified with amine-reacting tags for relative protein quantitation in proteomic applications
D Yeung, G Anderson, V Spicer, OV Krokhin
Journal of Chromatography A 1679, 463391, 2022
12022
Paradigm Shift: Major Role of Ion-Pairing-Dependent Size Exclusion Effects in Bottom-Up Proteomics Reversed-Phase Peptide Separations
D Yeung, V Spicer, RP Zahedi, OV Krokhin
Analytical Chemistry, 2024
2024
Automation of reaction monitoring
D Yeung
2019
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Articles 1–14