Separation orthogonality in liquid chromatography–mass spectrometry for proteomic applications: comparison of 16 different two-dimensional combinations D Yeung, B Mizero, D Gussakovsky, N Klaassen, Y Lao, V Spicer, ... Analytical chemistry 92 (5), 3904-3912, 2020 | 30 | 2020 |
Peptide retention time prediction in hydrophilic interaction liquid chromatography: Zwitter-ionic sulfoalkylbetaine and phosphorylcholine stationary phases D Yeung, N Klaassen, B Mizero, V Spicer, OV Krokhin Journal of Chromatography A 1619, 460909, 2020 | 21 | 2020 |
PythoMS: A Python framework to simplify and assist in the processing and interpretation of mass spectrometric data LPE Yunker, S Donnecke, M Ting, D Yeung, JS McIndoe Journal of chemical information and modeling 59 (4), 1295-1300, 2019 | 21 | 2019 |
Sequence-specific model for predicting peptide collision cross section values in proteomic ion mobility spectrometry CH Chang, D Yeung, V Spicer, K Ogata, O Krokhin, Y Ishihama Journal of Proteome Research 20 (7), 3600-3610, 2021 | 17 | 2021 |
Oxidation of titanocene (III): the deceptive simplicity of a color change D Yeung, J Penafiel, HS Zijlstra, JS McIndoe Inorganic Chemistry 57 (1), 457-461, 2018 | 17 | 2018 |
Peptide retention time prediction for peptides with post-translational modifications: N-terminal (α-amine) and lysine (ε-amine) acetylation B Mizero, D Yeung, V Spicer, OV Krokhin Journal of Chromatography A 1657, 462584, 2021 | 6 | 2021 |
Deep learning from harmonized peptide libraries enables retention time prediction of diverse post translational modifications DB Wilburn, AE Shannon, V Spicer, AL Richards, D Yeung, DL Swaney, ... BioRxiv, 2023.05. 30.542978, 2023 | 2 | 2023 |
Exploring the variable space of shallow machine learning models for reversed-phase retention time prediction D Yeung, V Spicer, RP Zahedi, O Krokhin Computational and Structural Biotechnology Journal 21, 2446-2453, 2023 | 2 | 2023 |
Accelerating Proteomics Using Broad Specificity Proteases X Jiang, D Yeung, Y Liu, V Spicer, H Afshari, Y Lao, F Lin, O Krokhin, ... Journal of Proteome Research 23 (4), 1360-1369, 2024 | 1 | 2024 |
Retention time prediction for post-translationally modified peptides: Ser, Thr, Tyr phosphorylation T Battellino, D Yeung, H Neustaeter, V Spicer, K Ogata, Y Ishihama, ... Journal of Chromatography A, 464714, 2024 | 1 | 2024 |
Compendium of Chromatographic Behavior of Post-translationally and Chemically Modified Peptides in Bottom-Up Proteomic Experiments Q Neale, A Prefontaine, T Battellino, B Mizero, D Yeung, V Spicer, ... Analytical Chemistry 95 (39), 14634-14642, 2023 | 1 | 2023 |
Chromatographic behaviour of peptides modified with amine-reacting tags for relative protein quantitation in proteomic applications D Yeung, G Anderson, V Spicer, OV Krokhin Journal of Chromatography A 1679, 463391, 2022 | 1 | 2022 |
Paradigm Shift: Major Role of Ion-Pairing-Dependent Size Exclusion Effects in Bottom-Up Proteomics Reversed-Phase Peptide Separations D Yeung, V Spicer, RP Zahedi, OV Krokhin Analytical Chemistry, 2024 | | 2024 |
Automation of reaction monitoring D Yeung | | 2019 |