| Comparison of in-solution, FASP, and S-trap based digestion methods for bottom-up proteomic studies KR Ludwig, MM Schroll, AB Hummon Journal of proteome research 17 (7), 2480-2490, 2018 | 164 | 2018 |
| Mass spectrometry for the discovery of biomarkers of sepsis KR Ludwig, AB Hummon Molecular BioSystems 13 (4), 648-664, 2017 | 107 | 2017 |
| Over 2300 phosphorylated peptide identifications with single-shot capillary zone electrophoresis-tandem mass spectrometry in a 100 min separation KR Ludwig, L Sun, G Zhu, NJ Dovichi, AB Hummon Analytical chemistry 87 (19), 9532-9537, 2015 | 51 | 2015 |
| iTRAQ quantitative proteomic profiling and MALDI–MSI of colon cancer spheroids treated with combination chemotherapies in a 3D printed fluidic device GJ LaBonia, KR Ludwig, CB Mousseau, AB Hummon Analytical chemistry 90 (2), 1423-1430, 2018 | 38 | 2018 |
| Glucose restriction combined with autophagy inhibition and chemotherapy in HCT 116 spheroids decreases cell clonogenicity and viability regulated by tumor suppressor genes MM Schroll, GJ LaBonia, KR Ludwig, AB Hummon Journal of proteome research 16 (8), 3009-3018, 2017 | 36 | 2017 |
| Capillary zone electrophoresis–tandem mass spectrometry for large-scale phosphoproteomics with the production of over 11,000 phosphopeptides from the colon carcinoma HCT116 … D Chen, KR Ludwig, OV Krokhin, V Spicer, Z Yang, X Shen, AB Hummon, ... Analytical chemistry 91 (3), 2201-2208, 2019 | 31 | 2019 |
| ColoType: a forty gene signature for consensus molecular subtyping of colorectal cancer tumors using whole-genome assay or targeted RNA-sequencing SA Buechler, MT Stephens, AB Hummon, K Ludwig, E Cannon, TC Carter, ... Scientific reports 10 (1), 12123, 2020 | 30 | 2020 |
| HNRNPH1 destabilizes the G-quadruplex structures formed by G-rich RNA sequences that regulate the alternative splicing of an oncogenic fusion transcript T Vo, T Brownmiller, K Hall, TL Jones, S Choudhari, I Grammatikakis, ... Nucleic Acids Research 50 (11), 6474-6496, 2022 | 16 | 2022 |
| Calcitriol supplementation causes decreases in tumorigenic proteins and different proteomic and metabolomic signatures in right versus left-sided colon cancer MM Schroll, KR Ludwig, KM Bauer, AB Hummon Metabolites 8 (1), 5, 2018 | 12 | 2018 |
| Evaluation of the mirn23a cluster through an iTRAQ-based quantitative proteomic approach KR Ludwig, R Dahl, AB Hummon Journal of proteome research 15 (5), 1497-1505, 2016 | 12 | 2016 |
| Chemical cytometry of thiols using capillary zone electrophoresis-laser induced fluorescence and TMPAB-o-M, an improved fluorogenic reagent XF Guo, J Arceo, BJ Huge, KR Ludwig, NJ Dovichi Analyst 141 (4), 1325-1330, 2016 | 12 | 2016 |
| Spatial stable isotopic labeling by amino acids in cell culture: pulse-chase labeling of three-dimensional multicellular spheroids for global proteome analysis NC Beller, JK Lukowski, KR Ludwig, AB Hummon Analytical chemistry 93 (48), 15990-15999, 2021 | 9 | 2021 |
| Cancer biology functional genomics: From small RNAs to big dreams S Sundara Rajan, KR Ludwig, KL Hall, TL Jones, NJ Caplen Molecular Carcinogenesis 59 (12), 1343-1361, 2020 | 6 | 2020 |
| Combined Short-Term Glucose Starvation and Chemotherapy in 3D Colorectal Cancer Cell Culture Decreases 14-3-3 Family Protein Expression and Phenotypic Response to Therapy MM Schroll, KR Ludwig, GJ LaBonia, EL Herring, AB Hummon Journal of The American Society for Mass Spectrometry 29 (10), 2012-2022, 2018 | 6 | 2018 |
| Enhancing standard of care chemotherapy efficacy using DNA-dependent protein kinase (DNA-PK) inhibition in preclinical models of Ewing sarcoma VJ Collins, KR Ludwig, AE Nelson, S Sundara Rajan, C Yeung, K Vulikh, ... Molecular Cancer Therapeutics, 2024 | 1 | 2024 |
| ColotypeR: A tool to classify colon cancers by consensus molecular subtype and subtype-specific risk of recurrence SA Buechler, SS Badve, Y Gokmen-Polar, E Herring, K Ludwig, ... J Clin Oncol 36, 632-632, 2018 | 1 | 2018 |
| Endogenous EWSR1 Exists in Two Visual Modalities That Reflect Its Associations with Nucleic Acids and Concentration at Sites of Active Transcription S Sundara Rajan, VJ Ebegboni, P Pichling, KR Ludwig, TL Jones, ... Molecular and Cellular Biology 44 (3), 103-122, 2024 | | 2024 |
| EWSR1’s visual modalities are defined by its association with nucleic acids and RNA polymerase II SS Rajan, VJ Ebegboni, P Pichling, KR Ludwig, TL Jones, R Chari, ... bioRxiv, 2023 | | 2023 |
| Visualization of endogenous EWSR1 in Ewing sarcoma cells reveals a regular nucleoplasmic organization that includes concentration at regions of active transcription SS Rajan, V Ebegboni, TL Jones, P Pichling, KR Ludwig, R Chari, ... Cancer Research 83 (7_Supplement), 1469-1469, 2023 | | 2023 |
| EWSR1's visual modalities are defined by its association with nucleic acids and RNA polymerase II S Sundara Rajan, VJ Ebegboni, P Pichling, KR Ludwig, TL Jones, ... bioRxiv, 2023.08. 16.553246, 2023 | | 2023 |
