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Rujia Dai
Rujia Dai
Verified email at upstate.edu
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Year
Transcriptome-wide isoform-level dysregulation in ASD, schizophrenia, and bipolar disorder
MJ Gandal, P Zhang, E Hadjimichael, RL Walker, C Chen, S Liu, H Won, ...
Science 362 (6420), eaat8127, 2018
10142018
The transcription factor POU3F2 regulates a gene coexpression network in brain tissue from patients with psychiatric disorders
C Chen, Q Meng, Y Xia, C Ding, L Wang, R Dai, L Cheng, P Gunaratne, ...
Science translational medicine 10 (472), eaat8178, 2018
862018
The DGCR5 long noncoding RNA may regulate expression of several schizophrenia-related genes
Q Meng, K Wang, T Brunetti, Y Xia, C Jiao, R Dai, D Fitzgerald, A Thomas, ...
Science translational medicine 10 (472), eaat6912, 2018
662018
Sex-differential DNA methylation and associated regulation networks in human brain implicated in the sex-biased risks of psychiatric disorders
Y Xia, R Dai, K Wang, C Jiao, C Zhang, Y Xu, H Li, X Jing, Y Chen, ...
Molecular psychiatry 26 (3), 835-848, 2021
542021
Positional effects revealed in Illumina methylation array and the impact on analysis
C Jiao, C Zhang, R Dai, Y Xia, K Wang, G Giase, C Chen, C Liu
Epigenomics 10 (5), 643-659, 2018
312018
Integrative analyses prioritize GNL3 as a risk gene for bipolar disorder
Q Meng, L Wang, R Dai, J Wang, Z Ren, S Liu, Y Xia, Y Jiang, F Duan, ...
Molecular Psychiatry 25 (11), 2672-2684, 2020
202020
Transcriptome-wide isoform-level dysregulation in ASD, schizophrenia, and bipolar disorder. Science 362, eaat8127
MJ Gandal, P Zhang, E Hadjimichael, RL Walker, C Chen, S Liu, H Won, ...
202018
Distinct phenotypes of inflammation associated macrophages and microglia in the prefrontal cortex schizophrenia compared to controls
Y Zhu, MJ Webster, CE Murphy, FA Middleton, PT Massa, C Liu, R Dai, ...
Frontiers in Neuroscience 16, 858989, 2022
192022
Brain banks spur new frontiers in neuropsychiatric research and strategies for analysis and validation
L Wang, Y Xia, Y Chen, R Dai, W Qiu, Q Meng, L Kuney, C Chen
Genomics, Proteomics and Bioinformatics 17 (4), 402-414, 2019
182019
Analyses of the autism-associated neuroligin-3 R451C mutation in human neurons reveal a gain-of-function synaptic mechanism
L Wang, VR Mirabella, R Dai, X Su, R Xu, A Jadali, M Bernabucci, I Singh, ...
Molecular psychiatry, 1-16, 2022
162022
Transcription factor POU3F2 regulates TRIM8 expression contributing to cellular functions implicated in schizophrenia
C Ding, C Zhang, R Kopp, L Kuney, Q Meng, L Wang, Y Xia, Y Jiang, ...
Molecular psychiatry 26 (7), 3444-3460, 2021
162021
Spatiotemporal specificity of correlated DNA methylation and gene expression pairs across different human tissues and stages of brain development
K Wang, R Dai, Y Xia, J Tian, C Jiao, T Mikhailova, C Zhang, C Chen, ...
Epigenetics 17 (10), 1110-1127, 2022
142022
BrainEXP: a database featuring with spatiotemporal expression variations and co-expression organizations in human brains
C Jiao, P Yan, C Xia, Z Shen, Z Tan, Y Tan, K Wang, Y Jiang, L Huang, ...
Bioinformatics 35 (1), 172-174, 2019
112019
swCAM: estimation of subtype-specific expressions in individual samples with unsupervised sample-wise deconvolution
L Chen, CT Wu, CH Lin, R Dai, C Liu, R Clarke, G Yu, JE Van Eyk, ...
Bioinformatics 38 (5), 1403-1410, 2022
72022
Agonal factors distort gene-expression patterns in human postmortem brains
J Dai, Y Chen, R Dai, Y Jiang, J Tian, S Liu, M Xu, M Li, J Zhou, C Liu, ...
Frontiers in Neuroscience 15, 614142, 2021
72021
Transcriptome-wide isoform-level dysregulation in ASD, schizophrenia, and bipolar disorder. Science
MJ Gandal, P Zhang, E Hadjimichael, RL Walker, C Chen, S Liu, H Won, ...
62018
Cross-ancestry, cell-type-informed atlas of gene, isoform, and splicing regulation in the developing human brain
C Wen, M Margolis, R Dai, P Zhang, PF Przytycki, DD Vo, A Bhattacharya, ...
medRxiv, 2023
52023
csuWGCNA: a combination of signed and unsigned WGCNA to capture negative correlations
R Dai, Y Xia, C Liu, C Chen
BioRxiv, 288225, 2018
52018
Evaluating performance and applications of sample-wise cell deconvolution methods on human brain transcriptomic data
R Dai, T Chu, M Zhang, X Wang, A Jourdon, F Wu, J Mariani, ...
bioRxiv, 2023
32023
Cell group analysis reveals changes in upper-layer neurons associated with schizophrenia
R Dai, L Chen, S Liu, CT Wu, Y Chen, Y Jiang, J Dai, Q Wang, R Kopp, ...
bioRxiv, 2020.10. 22.351213, 2020
12020
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