Bacterial multidrug efflux pumps: mechanisms, physiology and pharmacological exploitations J Sun, Z Deng, A Yan Biochemical and biophysical research communications 453 (2), 254-267, 2014 | 873 | 2014 |
1,520 reference genomes from cultivated human gut bacteria enable functional microbiome analyses Y Zou, W Xue, G Luo, Z Deng, P Qin, R Guo, H Sun, Y Xia, S Liang, Y Dai, ... Nature biotechnology 37 (2), 179-185, 2019 | 431 | 2019 |
Prophage Hunter: an integrative hunting tool for active prophages W Song, HX Sun, C Zhang, L Cheng, Y Peng, Z Deng, D Wang, Y Wang, ... Nucleic acids research 47 (W1), W74-W80, 2019 | 172 | 2019 |
Multiple approaches for massively parallel sequencing of SARS-CoV-2 genomes directly from clinical samples M Xiao, X Liu, J Ji, M Li, J Li, L Yang, W Sun, P Ren, G Yang, J Zhao, ... Genome medicine 12, 1-15, 2020 | 132 | 2020 |
The joint effects of sulfonamides and their potentiator on< i> Photobacterium phosphoreum</i>: Differences between the acute and chronic mixture toxicity mechanisms X Zou, Z Lin, Z Deng, D Yin, Y Zhang Chemosphere, 2011 | 116 | 2011 |
Intra-host variation and evolutionary dynamics of SARS-CoV-2 populations in COVID-19 patients Y Wang, D Wang, L Zhang, W Sun, Z Zhang, W Chen, A Zhu, Y Huang, ... Genome Medicine 13, 1-13, 2021 | 112 | 2021 |
Pigmented edible bean coats as natural sources of polyphenols with antioxidant and antibacterial effects RY Gan, ZQ Deng, AX Yan, NP Shah, WY Lui, CL Chan, H Corke LWT-Food Science and Technology 73, 168-177, 2016 | 108 | 2016 |
Model of Hormesis and Its Toxicity Mechanism Based on Quorum Sensing: A Case Study on the Toxicity of Sulfonamides to Photobacterium phosphoreum. Z Deng, Z Lin, X Zou, Z Yao, D Tian, D Wang, D Yin Environmental science & technology 46 (14), 7746, 2012 | 99 | 2012 |
Anaerobic expression of the gadE-mdtEF multidrug efflux operon is primarily regulated by the two-component system ArcBA through antagonizing the H-NS mediated repression Z Deng, Y Shan, Q Pan, X Gao, A Yan Frontiers in microbiology 4, 2013 | 58 | 2013 |
Novel approach to predicting hormetic effects of antibiotic mixtures on Vibrio fischeri X Zou, Z Lin, Z Deng, D Yin Chemosphere 90 (7), 2070-2076, 2013 | 55 | 2013 |
Population bottlenecks and intra-host evolution during human-to-human transmission of SARS-CoV-2 D Wang, Y Wang, W Sun, L Zhang, J Ji, Z Zhang, X Cheng, Y Li, F Xiao, ... Frontiers in medicine 8, 585358, 2021 | 46 | 2021 |
A docking-based receptor library of antibiotics and its novel application in predicting chronic mixture toxicity for environmental risk assessment X Zou, X Zhou, Z Lin, Z Deng, D Yin Environmental monitoring and assessment 185, 4513-4527, 2013 | 25 | 2013 |
Global Landscape of Clostridioides Difficile Phylogeography, Antibiotic Susceptibility, and Toxin Polymorphisms by Post-Hoc Whole-Genome Sequencing from the … H Zhao, DC Nickle, Z Zeng, PYT Law, MH Wilcox, L Chen, Y Peng, ... Infectious Diseases and Therapy 10, 853-870, 2021 | 20 | 2021 |
Role of environmental stresses in elevating resistance mutations in bacteria: Phenomena and mechanisms D Wang, Q Ning, Z Deng, M Zhang, J You Environmental Pollution 307, 119603, 2022 | 13 | 2022 |
Comparative genomic analysis of five freshwater cyanophages and reference-guided metagenomic data mining K Du, F Yang, JT Zhang, RC Yu, Z Deng, WF Li, Y Chen, Q Li, CZ Zhou Microbiome 10 (1), 128, 2022 | 10 | 2022 |
Harnessing stepping-stone hosts to engineer, select, and reboot synthetic bacteriophages in one pot L Cheng, Z Deng, H Tao, W Song, B Xing, W Liu, L Kong, S Yuan, Y Ma, ... Cell Reports Methods 2 (5), 2022 | 10 | 2022 |
Large-scale genomic epidemiology of Klebsiella pneumoniae identified clone divergence with hypervirulent plus antimicrobial-resistant characteristics causing within-ward strain … N Pei, Y Li, C Liu, Z Jian, T Liang, Y Zhong, W Sun, J He, X Cheng, H Li, ... Microbiology Spectrum 10 (2), e02698-21, 2022 | 9 | 2022 |
Study of the expression of bacterial multidrug efflux pumps in anaerobic conditions J Sun, Z Deng, DKC Fung, A Yan Bacterial Multidrug Exporters: Methods and Protocols, 253-268, 2018 | 4 | 2018 |
Characterization of a novel genus of jumbo phages and their application in wastewater treatment M Hu, B Xing, M Yang, R Han, H Pan, H Guo, Z Liu, T Huang, K Du, ... Iscience 26 (6), 2023 | 3 | 2023 |
Global transmission of broad-host-range plasmids derived from the human gut microbiome L Yang, G Mai, Z Hu, H Zhou, L Dai, Z Deng, Y Ma Nucleic Acids Research 51 (15), 8005-8019, 2023 | 2 | 2023 |