| The genesis and source of the H7N9 influenza viruses causing human infections in China TTY Lam, J Wang, Y Shen, B Zhou, L Duan, CL Cheung, C Ma, SJ Lycett, ... Nature 502 (7470), 241-244, 2013 | 522 | 2013 |
| Multiple approaches for massively parallel sequencing of SARS-CoV-2 genomes directly from clinical samples M Xiao, X Liu, J Ji, M Li, J Li, L Yang, W Sun, P Ren, G Yang, J Zhao, ... Genome medicine 12, 1-15, 2020 | 136 | 2020 |
| Intra-host variation and evolutionary dynamics of SARS-CoV-2 populations in COVID-19 patients Y Wang, D Wang, L Zhang, W Sun, Z Zhang, W Chen, A Zhu, Y Huang, ... Genome Medicine 13, 1-13, 2021 | 116 | 2021 |
| A compromised specific humoral immune response against the SARS-CoV-2 receptor-binding domain is related to viral persistence and periodic shedding in the gastrointestinal tract F Hu, F Chen, Z Ou, Q Fan, X Tan, Y Wang, Y Pan, B Ke, L Li, Y Guan, ... Cellular & molecular immunology 17 (11), 1119-1125, 2020 | 94 | 2020 |
| Population bottlenecks and intra-host evolution during human-to-human transmission of SARS-CoV-2 D Wang, Y Wang, W Sun, L Zhang, J Ji, Z Zhang, X Cheng, Y Li, F Xiao, ... Frontiers in medicine 8, 585358, 2021 | 46 | 2021 |
| Single‐nucleus RNA sequencing and spatial transcriptomics reveal the immunological microenvironment of cervical squamous cell carcinoma Z Ou, S Lin, J Qiu, W Ding, P Ren, D Chen, J Wang, Y Tong, D Wu, ... Advanced science 9 (29), 2203040, 2022 | 43 | 2022 |
| Single cell atlas for 11 non-model mammals, reptiles and birds D Chen, J Sun, J Zhu, X Ding, T Lan, X Wang, W Wu, Z Ou, L Zhu, P Ding, ... Nature Communications 12 (1), 7083, 2021 | 39 | 2021 |
| A path toward SARS-CoV-2 attenuation: metabolic pressure on CTP synthesis rules the virus evolution Z Ou, C Ouzounis, D Wang, W Sun, J Li, W Chen, P Marlière, A Danchin Genome biology and evolution 12 (12), 2467-2485, 2020 | 26 | 2020 |
| VThunter: a database for single-cell screening of virus target cells in the animal kingdom D Chen, C Tan, P Ding, L Luo, J Zhu, X Jiang, Z Ou, X Ding, T Lan, Y Zhu, ... Nucleic Acids Research 50 (D1), D934-D942, 2022 | 17 | 2022 |
| Genetic signatures for lineage/sublineage classification of HPV16, 18, 52 and 58 variants Z Ou, Z Chen, Y Zhao, H Lu, W Liu, W Li, P Ren, C Geng, M Xiao, G Hu, ... Virology 553, 62-69, 2021 | 13 | 2021 |
| Genetic characteristics of human papillomavirus type 16, 18, 52 and 58 in southern China Y Zu, Z Ou, D Wu, W Liu, L Liu, D Wu, Y Zhao, P Ren, Y Zhang, W Li, S Fu, ... Genomics 113 (6), 3895-3906, 2021 | 5 | 2021 |
| Mutation profiles, glycosylation site distribution and codon usage bias of human papillomavirus type 16 W Liu, J Li, H Du, Z Ou Viruses 13 (7), 1281, 2021 | 5 | 2021 |
| Spatial transcriptomics in cancer research: opportunities and challenges Z Ou, J Yin, L Wu, F Ginhoux, X Jin Innov Life 1, 100006, 2023 | 4 | 2023 |
| COVID-19 mRNA vaccine protects against SARS-CoV-2 Omicron BA. 1 infection in diet-induced obese mice through boosting host innate antiviral responses Y Chen, W Song, C Li, J Wang, F Liu, Z Ye, P Ren, Y Tong, J Li, Z Ou, ... EBioMedicine 89, 2023 | 4 | 2023 |
| Comparative analysis of single cell lung atlas of bat, cat, tiger, and pangolin X Wang, P Ding, C Sun, D Wang, J Zhu, W Wu, Y Wei, R Xiang, X Ding, ... Cell Biology and Toxicology, 1-5, 2022 | 3 | 2022 |
| Screening of cell‐virus, cell‐cell, gene‐gene crosstalk among animal kingdom at single cell resolution D Chen, Z Ou, J Zhu, H Wang, P Ding, L Luo, X Ding, C Sun, T Lan, ... Clinical and Translational Medicine 12 (8), e886, 2022 | 2 | 2022 |
| Viral receptor profiles of masked palm civet revealed by single-cell transcriptomics P Ding, H Wang, J Zhu, F An, J Xu, X Ding, L Luo, W Wu, Q Qin, Y Wei, ... Journal of genetics and genomics= Yi chuan xue bao 49 (11), 1072-1075, 2022 | 1 | 2022 |
| Screening of cell-virus, cell-cell, gene-gene cross-talks among kingdoms of life at single cell resolution D Chen, Z Ou, J Zhu, P Ding, H Wang, L Luo, X Ding, T Lan, W Wu, ... bioRxiv, 2021.08. 13.456190, 2021 | 1 | 2021 |
| Persistent lung inflammation and alveolar-bronchiolization due to Notch signaling dysregulation in SARS-CoV-2 infected hamster C Li, N Xiao, W Song, AHC Lam, F Liu, X Cui, Z Ye, Y Chen, P Ren, J Cai, ... bioRxiv, 2024.05. 13.593878, 2024 | | 2024 |
| Spatiotemporal transcriptomic profiling reveals the dynamic immunological landscape of alveolar echinococcosis Z Ou, L Li, P Ren, T Zhou, F He, J Chen, H Cai, X Han, Y Wu, J Li, X Li, ... bioRxiv, 2024.04. 04.577902, 2024 | | 2024 |
