An atlas of human long non-coding RNAs with accurate 5′ ends CC Hon, JA Ramilowski, J Harshbarger, N Bertin, OJL Rackham, J Gough, ... Nature 543 (7644), 199-204, 2017 | 1050 | 2017 |
An integrated expression atlas of miRNAs and their promoters in human and mouse D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Åström, ... Nature biotechnology 35 (9), 872-878, 2017 | 601 | 2017 |
Phylogeny-based evolutionary, demographical, and geographical dissection of North American type 2 porcine reproductive and respiratory syndrome viruses M Shi, TTY Lam, CC Hon, MP Murtaugh, PR Davies, RKH Hui, J Li, ... Journal of virology 84 (17), 8700-8711, 2010 | 437 | 2010 |
Molecular epidemiology of PRRSV: a phylogenetic perspective M Shi, TTY Lam, CC Hon, RKH Hui, KS Faaberg, T Wennblom, ... Virus research 154 (1-2), 7-17, 2010 | 436 | 2010 |
Analysis of the Genome and Transcriptome of Cryptococcus neoformans var. grubii Reveals Complex RNA Expression and Microevolution Leading to Virulence … G Janbon, KL Ormerod, D Paulet, EJ Byrnes III, V Yadav, G Chatterjee, ... PLoS genetics 10 (4), e1004261, 2014 | 403 | 2014 |
Evidence of the recombinant origin of a bat severe acute respiratory syndrome (SARS)-like coronavirus and its implications on the direct ancestor of SARS coronavirus CC Hon, TY Lam, ZL Shi, AJ Drummond, CW Yip, F Zeng, PY Lam, ... Journal of virology 82 (4), 1819-1826, 2008 | 248 | 2008 |
Update of the FANTOM web resource: expansion to provide additional transcriptome atlases M Lizio, I Abugessaisa, S Noguchi, A Kondo, A Hasegawa, CC Hon, ... Nucleic acids research 47 (D1), D752-D758, 2019 | 224 | 2019 |
The single-cell eQTLGen consortium MGP van der Wijst, DH De Vries, HE Groot, G Trynka, CC Hon, MJ Bonder, ... elife 9, e52155, 2020 | 189 | 2020 |
Comparative ribosome profiling reveals extensive translational complexity in different Trypanosoma brucei life cycle stages JJ Vasquez, CC Hon, JT Vanselow, A Schlosser, TN Siegel Nucleic acids research 42 (6), 3623-3637, 2014 | 177 | 2014 |
Molecular epidemiology of the novel coronavirus that causes severe acute respiratory syndrome Y Guan, JSM Peiris, B Zheng, LLM Poon, KH Chan, FY Zeng, CWM Chan, ... The Lancet 363 (9403), 99-104, 2004 | 171 | 2004 |
Functional annotation of human long noncoding RNAs via molecular phenotyping JA Ramilowski, CW Yip, S Agrawal, JC Chang, Y Ciani, IV Kulakovskiy, ... Genome research 30 (7), 1060-1072, 2020 | 152 | 2020 |
Genetic authentication of ginseng and other traditional Chinese medicine CC Hon, YC Chow, FY Zeng, FCC Leung Acta Pharmacologica Sinica 24 (9), 841-846, 2003 | 134 | 2003 |
Phylogenetic analysis reveals a correlation between the expansion of very virulent infectious bursal disease virus and reassortment of its genome segment B CC Hon, TY Lam, A Drummond, A Rambaut, YF Lee, CW Yip, F Zeng, ... Journal of virology 80 (17), 8503-8509, 2006 | 126 | 2006 |
C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution T Kouno, J Moody, ATJ Kwon, Y Shibayama, S Kato, Y Huang, M Böttcher, ... Nature communications 10 (1), 360, 2019 | 120 | 2019 |
Intraspecies diversity of SARS-like coronaviruses in Rhinolophus sinicus and its implications for the origin of SARS coronaviruses in humans J Yuan, CC Hon, Y Li, D Wang, G Xu, H Zhang, P Zhou, LLM Poon, ... Journal of general virology 91 (4), 1058-1062, 2010 | 119 | 2010 |
Strand-specific RNA-Seq reveals widespread and developmentally regulated transcription of natural antisense transcripts in Plasmodium falciparum TN Siegel, CC Hon, Q Zhang, JJ Lopez-Rubio, C Scheidig-Benatar, ... BMC genomics 15, 1-16, 2014 | 112 | 2014 |
Use of phylogenetics in the molecular epidemiology and evolutionary studies of viral infections TTY Lam, CC Hon, JW Tang Critical reviews in clinical laboratory sciences 47 (1), 5-49, 2010 | 106 | 2010 |
Identification of the Virulence Landscape Essential for Entamoeba histolytica Invasion of the Human Colon R Thibeaux, C Weber, CC Hon, MA Dillies, P Avé, JY Coppée, ... PLoS Pathogens 9 (12), e1003824, 2013 | 94 | 2013 |
Evolutionary and transmission dynamics of reassortant H5N1 influenza virus in Indonesia TTY Lam, CC Hon, OG Pybus, SL Kosakovsky Pond, RTY Wong, CW Yip, ... PLoS pathogens 4 (8), e1000130, 2008 | 91 | 2008 |
FANTOM enters 20th year: expansion of transcriptomic atlases and functional annotation of non-coding RNAs I Abugessaisa, JA Ramilowski, M Lizio, J Severin, A Hasegawa, ... Nucleic acids research 49 (D1), D892-D898, 2021 | 89 | 2021 |