| Handheld briefcase optical coherence tomography with real-time machine learning classifier for middle ear infections J Won, GL Monroy, RI Dsouza, DR Spillman Jr, J McJunkin, RG Porter, ... Biosensors 11 (5), 143, 2021 | 23 | 2021 |
| Synthetic polarization-sensitive optical coherence tomography by deep learning Y Sun, J Wang, J Shi, SA Boppart npj Digital Medicine 4 (1), 105, 2021 | 13 | 2021 |
| Differential uptake of antisense oligonucleotides in mouse hepatocytes and macrophages revealed by simultaneous two-photon excited fluorescence and coherent Raman imaging P Mukherjee, E Aksamitiene, A Alex, J Shi, K Bera, C Zhang, DR Spillman, ... nucleic acid therapeutics 32 (3), 163-176, 2022 | 8 | 2022 |
| Weakly Supervised Identification and Localization of Drug Fingerprints Based on Label-Free Hyperspectral CARS Microscopy J Shi, K Bera, P Mukherjee, A Alex, EJ Chaney, B Spencer-Dene, J Majer, ... Analytical Chemistry 95 (29), 10957-10965, 2023 | 7 | 2023 |
| Automated classification of otitis media with OCT: augmenting pediatric image datasets with gold-standard animal model data GL Monroy, J Won, J Shi, MC Hill, RG Porter, MA Novak, W Hong, ... Biomedical Optics Express 13 (6), 3601-3614, 2022 | 6 | 2022 |
| Pixelation with concentration-encoded effective photons for molecular optical sectioning microscopy G Wang, RR Iyer, JE Sorrells, E Aksamitiene, EJ Chaney, CA Renteria, ... arXiv preprint arXiv:2307.04670, 2023 | 3 | 2023 |
| Weakly supervised identification of microscopic human breast cancer-related optical signatures from normal-appearing breast tissue J Shi, H Tu, J Park, M Marjanovic, AM Higham, NN Luckey, KA Cradock, ... Biomedical Optics Express 14 (4), 1339-1354, 2023 | 3 | 2023 |
| Texture-based speciation of otitis media-related bacterial biofilms from optical coherence tomography images using supervised classification FR Zaki, GL Monroy, J Shi, K Sudhir, SA Boppart Research Square, 2023 | 1 | 2023 |
| Localization of unlabeled bepirovirsen antisense oligonucleotide in murine tissues using in situ hybridization and CARS imaging B Spencer-Dene, P Mukherjee, A Alex, K Bera, WJ Tseng, J Shi, ... RNA 29 (10), 1575-1590, 2023 | 1 | 2023 |
| Label free and non-destructive imaging approach for cell line selection of genetically modified functional Chinese Hamster Ovary (CHO) Cells P Mukherjee, E Aksamitiene, A Alex, J Shi, E Chaney, RV Talaban, ... Imaging, Manipulation, and Analysis of Biomolecules, Cells, and Tissues XX …, 2022 | 1 | 2022 |
| Early selection of desired biopharmaceutical CHO cell lines using label-free multimodal optical microscopy and machine learning J Shi, A Ho, EJ Chaney, JE Sorrells, K Tan, A Alex, R Talaban, ... Imaging, Manipulation, and Analysis of Biomolecules, Cells, and Tissues XXII …, 2024 | | 2024 |
| Attention-based weakly-supervised deep learning for the identification and localization of drug fingerprints based on label-free hyperspectral CARS microscopy J Shi, K Bera, P Mukherjee, A Alex, EJ Chaney, B Spencer-Dene, J Majer, ... Visualizing and Quantifying Drug Distribution in Tissue VIII, PC1282106, 2024 | | 2024 |
| Self-supervised deep learning enables robust fluorescence lifetime estimation with limited photons J Shi, A Ho, K Tan, JE Sorrells, RR Iyer, EJ Chaney, DR Spillman Jr, ... Computational Optical Imaging and Artificial Intelligence in Biomedical …, 2024 | | 2024 |
| Predicting productivity in CHO cells based on co-occurrence of metabolism-related features in simultaneous label-free autofluorescence multiharmonic (SLAM) microscopy A Ho, J Shi, E Chaney, J Sorrells, K Tan, A Alex, R Talaban, DR Spillman, ... Label-free Biomedical Imaging and Sensing (LBIS) 2024, PC1285407, 2024 | | 2024 |
| Supercontinuum intrinsic fluorescence imaging heralds ‘free view’of living systems G Wang, L Li, X Liao, S Wang, J Mitchell, RACC Rabel, S Luo, J Shi, ... bioRxiv, 2024.01. 26.577383, 2024 | | 2024 |
| Speciation of otitis media causing bacterial biofilms using texture analysis features from OCT images FR Zaki, K Sudhir, GL Monroy, J Shi, SA Boppart Imaging, Therapeutics, and Advanced Technology in Head and Neck Surgery and …, 2023 | | 2023 |
| Characterization of Chinese hamster ovary (CHO) cell lines by simultaneous label-free autofluorescence multi-harmonic (SLAM) microscopy for upstream bioprocessing (Conference … A Ho, J Shi, E Chaney, C Snyder, A Alex, R Talaban, J Sorrells, ... Imaging, Manipulation, and Analysis of Biomolecules, Cells, and Tissues XXI …, 2023 | | 2023 |
| Machine learning-assisted label-free multimodal optical bioimaging for biopharmaceutical CHO cell line characterization J Shi, A Ho, CE Snyder, E Chaney, JE Sorrells, A Alex, R Talaban, ... Multimodal Biomedical Imaging XVIII, PC123710D, 2023 | | 2023 |
| Explainable weakly-supervised learning for optical biomarker discovery in multiphoton virtual histology J Shi, H Tu, J Park, SA Boppart AI and Optical Data Sciences III, PC1201905, 2022 | | 2022 |
| AI-assisted simultaneous label-free autofluorescence multiharmonic (SLAM) microscopy for the discovery of human breast cancer-related optical biomarkers J Shi, H Tu, J Park, SA Boppart Multimodal Biomedical Imaging XVII, PC1195205, 2022 | | 2022 |
Stephen A. Boppart, M.D., Ph.D.Professor and Grainger Distinguished Chair in Engineering, University of Illinois Urbana-ChampaignVerified email at photonicareinc.com
