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Vasilis Ntranos
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EmptyDrops: distinguishing cells from empty droplets in droplet-based single-cell RNA sequencing data
ATL Lun, S Riesenfeld, T Andrews, TP Dao, T Gomes, ...
Genome biology 20, 1-9, 2019
5772019
Targeted elimination of senescent beta cells prevents type 1 diabetes
PJ Thompson, A Shah, V Ntranos, F Van Gool, M Atkinson, A Bhushan
Cell metabolism 29 (5), 1045-1060. e10, 2019
2622019
A multimodal cell census and atlas of the mammalian primary motor cortex
Principal manuscript editors, Analysis coordination, ...
Nature 598 (7879), 86-102, 2021
2292021
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
Z Yao, H Liu, F Xie, S Fischer, RS Adkins, AI Aldridge, SA Ament, ...
Nature 598 (7879), 103-110, 2021
1732021
Fast and accurate single-cell RNA-seq analysis by clustering of transcript-compatibility counts
V Ntranos, GM Kamath, JM Zhang, L Pachter, DN Tse
Genome biology 17 (1), 112, 2016
1472016
A discriminative learning approach to differential expression analysis for single-cell RNA-seq
V Ntranos, L Yi, P Melsted, L Pachter
Nature methods 16 (2), 163-166, 2019
1262019
The barcode, UMI, set format and BUStools
P Melsted, V Ntranos, L Pachter
Bioinformatics 35 (21), 4472-4473, 2019
1212019
Cognitive femtocells: Breaking the spatial reuse barrier of cellular systems
A Adhikary, V Ntranos, G Caire
2011 Information Theory and Applications Workshop, 1-10, 2011
1182011
Determining sequencing depth in a single-cell RNA-seq experiment
MJ Zhang, V Ntranos, D Tse
Nature communications 11 (1), 774, 2020
1132020
Single-cell transcriptional profiling of human thymic stroma uncovers novel cellular heterogeneity in the thymic medulla
JL Bautista, NT Cramer, CN Miller, J Chavez, DI Berrios, LE Byrnes, ...
Nature Communications 12 (1), 1096, 2021
992021
Cellular interference alignment
V Ntranos, MA Maddah-Ali, G Caire
IEEE Transactions on Information Theory 61 (3), 1194-1217, 2015
872015
Expanding the compute-and-forward framework: Unequal powers, signal levels, and multiple linear combinations
B Nazer, VR Cadambe, V Ntranos, G Caire
IEEE Transactions on Information Theory 62 (9), 4879-4909, 2016
652016
An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types
Z Yao, H Liu, F Xie, S Fischer, AS Booeshaghi, RS Adkins, AI Aldridge, ...
Biorxiv, 2020.02. 29.970558, 2020
612020
Genome-wide prediction of disease variant effects with a deep protein language model
N Brandes, G Goldman, CH Wang, CJ Ye, V Ntranos
Nature Genetics 55 (9), 1512-1522, 2023
602023
Understanding interdependency through complex information sharing
F Rosas, V Ntranos, CJ Ellison, S Pollin, M Verhelst
Entropy 18 (2), 38, 2016
532016
Real-time multi-criteria social graph partitioning: A game theoretic approach
N Armenatzoglou, H Pham, V Ntranos, D Papadias, C Shahabi
Proceedings of the 2015 ACM SIGMOD International Conference on Management of …, 2015
422015
On multicast beamforming for minimum outage
V Ntranos, ND Sidiropoulos, L Tassiulas
IEEE Transactions on Wireless Communications 8 (6), 3172-3181, 2009
402009
Medoids in almost-linear time via multi-armed bandits
V Bagaria, G Kamath, V Ntranos, M Zhang, D Tse
International Conference on Artificial Intelligence and Statistics, 500-509, 2018
392018
Single-cell multiomics defines tolerogenic extrathymic Aire-expressing populations with unique homology to thymic epithelium
J Wang, CA Lareau, JL Bautista, AR Gupta, K Sandor, J Germino, Y Yin, ...
Science immunology 6 (65), eabl5053, 2021
382021
Allocations for heterogenous distributed storage
V Ntranos, G Caire, AG Dimakis
2012 IEEE International Symposium on Information Theory Proceedings, 2761-2765, 2012
362012
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Articles 1–20