| Modeling cancer drug response through drug-specific informative genes L Parca, G Pepe, M Pietrosanto, G Galvan, L Galli, A Palmeri, ... Scientific reports 9 (1), 15222, 2019 | 56 | 2019 |
| Inhibition of HECT E3 ligases as potential therapy for COVID-19 G Novelli, J Liu, M Biancolella, T Alonzi, A Novelli, JJ Patten, ... Cell Death & Disease 12 (4), 310, 2021 | 40 | 2021 |
| PDBe-KB: collaboratively defining the biological context of structural data Nucleic acids research 50 (D1), D534-D542, 2022 | 32 | 2022 |
| BRIO: a web server for RNA sequence and structure motif scan A Guarracino, G Pepe, F Ballesio, M Adinolfi, M Pietrosanto, ... Nucleic acids research 49 (W1), W67-W71, 2021 | 11 | 2021 |
| Looking for plant microRNAs in human blood samples: bioinformatics evidence and perspectives L Olmi, G Pepe, M Helmer-Citterich, A Canini, A Gismondi Plant Foods for Human Nutrition 78 (2), 399-406, 2023 | 7 | 2023 |
| Evaluation of potential miRNA sponge effects of SARS genomes in human G Pepe, A Guarracino, F Ballesio, L Parca, G Ausiello, M Helmer-Citterich Non-coding RNA research 7 (1), 48-53, 2022 | 7 | 2022 |
| NRF2 connects Src tyrosine kinase to ferroptosis resistance in glioblastoma C Cirotti, I Taddei, C Contadini, C Di Girolamo, G Pepe, M De Bardi, ... Life Science Alliance 7 (1), 2024 | 2 | 2024 |
| Variation in the co-expression profile highlights a loss of miRNA-mRNA regulation in multiple cancer types G Pepe, L Parca, L Viviani, G Ausiello, M Helmer-Citterich Non-coding RNA Research 7 (2), 98-105, 2022 | 2 | 2022 |
| Dissecting the GenomeGenomes for Drug Response Prediction G Pepe, C Carrino, L Parca, M Helmer-Citterich Data Mining Techniques for the Life Sciences, 187-196, 2022 | 2 | 2022 |
| Exploring the landscape of tools and resources for the analysis of long non-coding RNAs M Ballarino, G Pepe, M Helmer-Citterich, A Palma Computational and Structural Biotechnology Journal, 2023 | 1 | 2023 |
| Artificial intelligence methods enhance the discovery of RNA interactions G Pepe, R Appierdo, C Carrino, F Ballesio, M Helmer-Citterich, ... Frontiers in Molecular Biosciences 9, 1000205, 2022 | 1 | 2022 |
| A meta-analysis approach to gene regulatory network inference identifies key regulators of cardiovascular diseases G Pepe, R Appierdo, G Ausiello, M Helmer-Citterich, PF Gherardini International Journal of Molecular Sciences 25 (8), 4224, 2024 | | 2024 |
| Unveiling the signaling network of FLT3-ITD AML improves drug sensitivity prediction S Latini, V Venafra, G Massacci, V Bica, S Graziosi, GM Pugliese, ... Elife 12, RP90532, 2024 | | 2024 |
| Large-scale DNA sequencing identifies rare variants associated with Systemic Lupus Erythematosus susceptibility in known risk genes A Latini, P Borgiani, G De Benedittis, C Ciccacci, L Novelli, G Pepe, ... Gene, 148279, 2024 | | 2024 |
| Clinical and functional characterization of COL2A1 p. Gly444Ser variant: From a fetal phenotype to a previously undisclosed postnatal phenotype E Marchionni, MR D'Apice, V Lupo, G Lattanzi, E Mattioli, G Lisignoli, ... Bone Reports 19, 101728, 2023 | | 2023 |
| Inhibition of exosome biogenesis affects cell motility in heterogeneous sub-populations of paediatric-type diffuse high-grade gliomas G Pericoli, A Galardi, A Paolini, LL Petrilli, G Pepe, A Palma, M Colletti, ... Cell & Bioscience 13 (1), 207, 2023 | | 2023 |
| A feature-based meta-analysis approach to unravel the pathophysiological landscape of autoimmune diseases G Pepe, F Vallania, M HELMER CITTERICH, R Appierdo, P Gherardini | | 2023 |
| A Feature-based meta-analysis approach to unravel the pathophysiological landscape of autoimmune diseases R Appierdo, G Pepe, M Helmer-Citterich, F Vallania, P Gherardini | | 2023 |
| Human lncRNAs harbor conserved modules embedded in different sequence contexts F Ballesio, G Pepe, G Ausiello, A Novelletto, M Helmer-Citterich, ... bioRxiv, 2023.11. 01.565086, 2023 | | 2023 |
| Identification of modules in human lncRNAs G Pepe, B Francesco, G Ausiello, P Gherardini, M HELMER CITTERICH | | 2022 |
